Salvia hispanica (chia): 125186527
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Entry
125186527 CDS
T09851
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like isoform X1
KO
K04523
ubiquilin
Organism
shis
Salvia hispanica (chia)
Pathway
shis04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125186527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125186527
03051 Proteasome [BR:
shis03051
]
125186527
Membrane trafficking [BR:
shis04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
125186527
Proteasome [BR:
shis03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
125186527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
Ubiquitin_2
XPC-binding
UBA_NBR1_C
Dsc3_N
Rad60-SLD_2
UBA_HOIP
RPN13_C
Motif
Other DBs
NCBI-GeneID:
125186527
NCBI-ProteinID:
XP_047938854
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All DBs
Position
5:10900754..10905370
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AA seq
542 aa
AA seq
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MAAEADSTTGVAAIEEVNVNIRCSNGSKFSVKTNLESTVAEFKGVLAQNCDVPADQQRLI
YKGRILKDDQTLVSYGLQADHTIHMVRGSAPAAAPSPAPVPTGPGNTTTTPAATQGGGPN
PGGTGLAGTGASLFPGLGLGGLGGTGGASGGLFGAGLPEFEQVQQQLTQNPNMMRDIMNM
PAIQSLMNNPEIMRSLIMSNPQMREIIDRNPELAHILNDPSVLRQTLEAARNPELMREMM
RNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTIGGNAATDAGSNPFAALLGNQGGI
QTRDGANSTTATETGTAVPNANPLPNPWSNTGGSQTMNATRTNPTGDARPPPNTGLGGLG
LPDLGSTGLGDPTAYSQLLQNPAVSQMMQSLLSNPQYMEQIMGMNPQLRSMLDMNPQLRE
MMQNPELLRQLTSSDMMQQMMALQQQLTRQQSTPEGDQTNQNRGPQNNMGLDMLMNMFGG
LGAGGFAVPNAPDVPPEELYATQLSQLQEMGFFDTQENIRALRATSGNVHAAVERLLGNL
GQ
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgaggcggactccaccacgggggttgcggcgattgaggaggtgaacgtaaac
atccgatgctcaaacggctctaaattttcggtgaaaacgaacctcgaatcgacggtggcg
gaattcaaaggtgttttggcgcagaattgcgatgtgccagctgatcaacagcggttgatc
tacaagggccggatcttgaaggatgaccaaaccctagtcagctatggtctgcaggcagat
cacactattcacatggttcgtggttctgcaccagctgctgcaccttctcctgctccggtt
cctactggtcctgggaacaccaccaccactcctgctgccacacaaggtggtggtccgaat
cctgggggtactggtttggctggtacgggtgcatccttatttccagggcttggcttaggt
ggactaggtggtactggaggggcatctggtggattatttggagctggacttccagaattt
gaacaggtgcagcaacaactaactcagaatcctaacatgatgagggacataatgaacatg
cctgccattcagagcttgatgaacaaccctgagattatgcgcagcctaattatgagtaac
cctcaaatgcgtgagataattgatcggaaccccgaacttgctcacattctgaatgatcct
agtgtccttcggcaaacattagaagcagcaaggaaccctgagctaatgcgtgaaatgatg
agaaacactgacagggcaatgagcaacattgaatcatctcctgagggattcaacatgctt
aggcgcatgtatgaaaatgtacaagaacccttcctgaatgcaacaaccataggtggtaat
gctgcgactgatgctggatcgaatccatttgctgcactcctggggaaccaagggggcata
caaactagagatggagctaattcaacaactgcaactgaaacaggaacagctgttccaaat
gctaacccacttcctaatccatggagcaatactggaggttctcaaacaatgaatgctacc
agaactaatccaactggcgatgcgagaccacctccaaatacaggactgggaggacttggt
cttcctgatttagggagtacaggcttgggtgatcctactgcgtacagtcagttgttgcaa
aatccggctgtgtcacagatgatgcagagcttgctttccaaccctcagtacatggaacaa
atcatgggcatgaaccctcaactacgcagcatgcttgacatgaaccctcaattgagagaa
atgatgcaaaacccagaacttcttcgacagttaacttcgtctgatatgatgcagcaaatg
atggctttgcagcaacaacttactcggcagcagtctactccggaaggagaccagactaat
caaaatagaggaccacaaaacaatatgggtttggacatgctgatgaatatgtttggtgga
ctcggagctggtggcttcgctgttcctaatgcccctgacgtgcccccagaagaactgtat
gcaactcagctatcacagctccaagagatgggtttcttcgacactcaagagaacatcaga
gcactccgcgccacctcaggaaacgttcacgcagctgttgaacgacttctaggaaacctc
gggcaatag
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