Salvia hispanica (chia): 125186674
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Entry
125186674 CDS
T09851
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shis03041
]
125186674
Spliceosome [BR:
shis03041
]
Common components
Common spliceosomal components
General mRNP proteins
125186674
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
125186674
NCBI-ProteinID:
XP_047939047
LinkDB
All DBs
Position
5:complement(10526440..10532036)
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AA seq
574 aa
AA seq
DB search
MDFDEYEYLENTVENPEAKKLEGKANGGGKGDYEEKDRSRSSKLRSVEEDGDDLDHPSKP
SRSRNESYDYEKDRGTRYGSSSRDRERGERGERGERGERDRREHRTRDKEERNRDREKDS
DKKRNGNRERRERDNDRDRIKDEEHERSKRSRNHSERHHEERTREKSKEVENAESEFKPR
ERVFRNQDRDNRRYKDKREEKVEPEVDPERDQRTVFAYQITLKAGERDIYEFFSRAGKVR
DVRLIMDRNTRRSKGVGYIEFYDSMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTA
ASGGLLGPYSGGARRLYVGNLPLTIKEEQLRQVFEPFGAVELVQMPSDPGTGNCKGYAFI
QFARLEDAKAAQNLNGQLEIAGRLIKVSAITDQAGMQEAGVNLADLDDDEGNGLSLNAQS
RALLMQKLDRTGTASSITGSSVASAFGQASGQMLPGLTPFSMPALTVPPVDTIGTPSECL
LLKNMFDPNSETEPDFDLDIKEDVQEECSKFGRLKHIYIEKNSAGFVYLRFENAQAAMAA
QNALHGRWFAGKMITATYMVHSDYESKFPDSSSS
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggattttgatgaatatgaatacctagaaaatacagtggagaatccagaagctaagaaa
ttggaggggaaggccaatggtggtggaaaaggtgattatgaagagaaggacaggagtcgg
agctcgaagctcagaagtgtcgaggaagatggggatgatttggatcacccgtcgaagccg
tctaggtcaagaaacgagtcttatgattatgagaaagataggggaacacgctatggctca
tcttcaagagatagggagagaggcgagagaggtgaaagaggggagagaggcgagagagat
agacgggagcatcgaacaagggacaaggaggagaggaatagagatagagagaaggatagt
gacaagaaaaggaatggtaacagagagagaagagaacgtgataacgacagagatagaatc
aaggacgaagaacacgagaggtccaaacgaagcagaaatcactcagaaaggcatcatgaa
gaacgtacgagagagaaaagtaaagaagtggagaatgctgaatcagaatttaaaccaagg
gagagggtgtttagaaatcaagaccgtgacaacagaagatacaaagacaaaagggaagag
aaagtggagccagaagttgaccccgagcgagaccagaggacagtttttgcttatcagatc
accttaaaggctggtgagcgagatatatatgagttcttctctagagctggcaaggtcaga
gatgtgcggcttataatggatcgcaacaccagacgctccaaaggagtcggatacattgag
ttttatgattcaatgtctgttcctatggcaatagctctatcgggtcagccacttcttggt
cagccagtcatggttaaaccatctgaagctgagaagaatcttgtgcagtctactaccgct
gccagcggaggacttcttggcccatattcagggggtgctagaaggctatatgttggcaat
ctacctcttactatcaaagaagaacagcttcgccaggtatttgagccttttggtgctgtg
gagcttgtacagatgcccagtgatccagggactgggaattgcaaaggctatgcttttata
cagtttgcgcgcttagaagatgcaaaggctgctcaaaatctgaatggacaactggagatt
gcaggtcgattaatcaaggtttctgctattactgatcaagccggaatgcaagaggctgga
gtaaatcttgctgatctggatgatgatgagggcaatggtttgtccttgaatgcacagtct
cgtgcgcttcttatgcagaaattggaccgaactggaactgcttcaagtatcactggttca
tcagtagcatcagcttttggacaggcctctggtcagatgcttcctggtctaacacctttt
tctatgcctgctcttacggttccacctgtagatacaattggtactcccagtgaatgttta
ttgctgaagaacatgtttgatcctaattcagagaccgagccagattttgatctagatata
aaggaagatgttcaggaggaatgttcaaaatttggcagattaaagcacatctacattgaa
aagaattcagctgggtttgtgtacctgcggtttgaaaatgctcaagcggccatggctgcc
caaaacgcacttcatggtaggtggtttgctggaaagatgatcacggcgacctacatggtt
cacagtgactatgaatctaaatttcctgatagcagcagcagctag
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