Salvia hispanica (chia): 125186704
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Entry
125186704 CDS
T09851
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase FLY2-like
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125186704
Enzymes [BR:
shis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125186704
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125186704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-RING_5
zf-C3HC4
zf-C3HC4_3
DUF2921
PHD_NSD
zf-ANAPC11
zf-RING_UBOX
zf-RING_16
zf-P11
zf_RING_Vps8
RINGv
Motif
Other DBs
NCBI-GeneID:
125186704
NCBI-ProteinID:
XP_047939086
LinkDB
All DBs
Position
5:complement(1573896..1581014)
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AA seq
559 aa
AA seq
DB search
MESWSLLRFLLRNLFGVWSILVVMWPVNGFRPLRQRRSWGEEWLPIGKDDQELGPFSSWN
VTGTYRGSWKFPDSANSSSKFADFRKSSGNSILELISTPTKITGVHYVQGVIIFHDVFDN
ENDVHGARIRVEGVYIWPFRQLRMVANSGKESEFGQEDDYLLSNPYHLLGVFSSQVFQES
PREKIWKRKQSPLYEMEKHCNIEIAAKISRASSRRNGGDQDKYYLEGVMESPSVDDDVDC
FSPMLLNATSVNVEVYYNKAVNYTLMVTFISFLEVLLLIRQMEHSNTQSGAAKVSLLMIG
HQAIMDAYICLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKANRPSTNGE
NWETMRRELSVLYSRFYGILLGGILVMYEFHNFLRIILLLLHSFWIPQIVINVVRDSRKP
LHPHYILGMTITRIAIPLYVFGCPHNFMRIEPDQRWCISLAFFMGLQVFILLLQHYLGSR
WFIPRQILPEKYSYYRRFLQGSSHHATDCVICMTAIDLSQRLNDCMVTPCDHFFHGSCLQ
RWMDIKMECPTCRRPLPPA
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggaaagttggagtcttttgcggtttctgttgaggaatctttttggggtatggtccatt
ttagtggtgatgtggcctgtgaatgggtttaggcctttgaggcagagacggtcttggggt
gaagagtggcttcctattggcaaggatgatcaagaattgggaccattttcttcttggaac
gtaacagggacctatagagggagttggaagtttccagattctgcaaatagctcttccaag
tttgctgattttaggaagtccagtggaaattcgatactagaactaatcagtacaccaaca
aaaataaccggtgtacactatgtgcagggagttataattttccatgacgtgtttgacaat
gagaatgatgtacacggagctcgaatcagggtagaaggtgtgtatatttggcctttcaga
caactaagaatggtggctaacagtggaaaagagagtgagtttgggcaggaagatgattat
ttattgtctaacccgtatcacttgctcggagttttctcgtcccaggtgtttcaggagtct
ccacgagaaaaaatctggaagaggaaacaatccccactttacgaaatggagaaacactgc
aacattgagatcgctgctaaaatttctcgagcgtcttccaggagaaatggtggagatcaa
gacaagtactatctagaaggagttatggagagcccttcagtggatgacgatgtagattgc
ttctcgcccatgctcttgaatgcgacttctgtcaacgtcgaagtctactataacaaagca
gttaactacactttgatggttacctttatatctttcctcgaagttctattgttaatccgg
caaatggaacatagtaacacccaatcaggggctgccaaagtttcgcttctgatgatcggg
catcaagctataatggatgcttatatctgccttctacatctcactgccggaattttagtt
gaatctctatttaatgcttttgcaacggcggcatttttcaagtttgtggttttctcaatc
tttgaaatgcggtacctacttgctatatggaaggcgaataggccatcaactaacggagag
aattgggagacgatgaggcgcgagctctcggttctttacagtcgtttttacgggatcctt
ttaggtggcattcttgtcatgtacgagttccacaattttcttcgaatcatccttctcctc
ctccactctttctggattccacaaatagtgattaacgtagttcgtgactcgaggaagcca
ttgcatcctcattatatcctagggatgactataactcgaattgctattcccttatacgta
ttcggttgcccacataatttcatgcgaatagagcccgatcagaggtggtgtatctctttg
gccttttttatgggactgcaagtcttcattcttcttctccagcattatctcggatcccgt
tggttcattccccgtcagattttaccggagaaatatagctactataggcgattccttcaa
ggttcgagccaccacgctacggattgtgtcatttgcatgaccgccattgacctcagccag
cgcttgaatgattgcatggtgacgccgtgcgatcatttctttcacggaagctgcttgcag
agatggatggacataaaaatggaatgcccgacgtgccgccgtcccctcccacctgcttag
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