KEGG   Salvia hispanica (chia): 125186705
Entry
125186705         CDS       T09851                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform X1
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
shis  Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:shis00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:shis03016]
    125186705
Enzymes [BR:shis01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     125186705
Transfer RNA biogenesis [BR:shis03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    125186705
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH zf-CCCH_4 zf_CCCH_4 DEAD_2 zf-CCCH_9 zf-CCCH_PARP12
Other DBs
NCBI-GeneID: 125186705
NCBI-ProteinID: XP_047939090
LinkDB
Position
5:complement(10009068..10012676)
AA seq 680 aa
MEDPSPDTLNGVVSTDAPPTLPHCQLTAAELVAKSIAPVKREFLRPPPARNCDKTADNNS
DDKEAPQAAAPAPILKDKKSKRQMKRDRRQEQKSALHICPTVAKSGNVSSCVYGENCRFS
HDLEAFKSQKPADLEGVCPFLSNAGPCPYGLACRFGGTHKVDNGEVSTTANVDKKNSEMN
VLTKDVQRLLWKNRMKFPKADAALKLLGLQVQGKKAKPSGNDNDDETNGSNVNGNGCCRE
DSAEVLEEDIVDKADVADEVRRSKKTKCSTDEACDALTDGGVNIHEKDVGESCKQSERES
VVENIVEDNDKCLKLHPREKKIIDFRDKLYLAPLTTVGNLPFRRVCKGLGVDITCGEMAM
CTSLLQGQASEWALLRRHSSEDFFGVQICGAFPDTVARTVELIDDNCTLDFIDINMGCPI
DIVVNKGAGSALLTKPMRMKSVVEASSKAVSTPLTLKVRTGYFEGKNRIDSLIADMGNWG
TTAVTVHGRTRQQRYYKLADWEYIYQCARAAPSNLQVLGNGDVYSYLDWNAHKSDCPELS
TCMIARGALVKPWIFTEIKEQRHWDITSGERLNILKDYVRFGLEHWGSDSKGVETTRHFL
LEWLGYTCRYIPVGLLDVIPPKINWRAPSYFGRDDLETLMGSDSAADWIRLTEMLLGKVP
PGFTFAPKHKSNAYDKAENG
NT seq 2043 nt   +upstreamnt  +downstreamnt
atggaagacccgtcacccgatacgttaaacggcgtcgtctccactgatgccccgccgacg
ctgccgcattgtcaactgaccgccgcggagctggtggctaaatccatagctccagtcaag
agagaattcctccgtccgcctcccgctagaaactgcgacaagaccgccgataataattcc
gacgataaagaagcaccgcaagccgccgccccagctccaatactcaaggacaagaaatcc
aagcgccaaatgaaacgtgaccgccgtcaggagcaaaaatctgcgttgcatatatgccct
acggtagccaagagcgggaatgttagttcgtgcgtgtatggtgagaactgccgcttcagc
catgatttggaagcattcaaatctcagaaacctgctgatttggaaggtgtttgccctttc
ctgagcaacgcggggccgtgcccttacggtctggcatgtagatttggtggcacacataag
gttgataatggcgaagtttccaccactgctaatgtagataagaaaaacagtgaaatgaat
gtattgaccaaggatgttcagaggcttttgtggaaaaataggatgaaatttcccaaggca
gatgctgcgctcaagcttcttggccttcaggtgcagggaaaaaaggcaaagcccagtggc
aatgacaatgatgatgaaaccaatggttctaatgtaaatggaaatggttgttgcagagaa
gattctgcagaagttttggaagaagatattgtcgacaaggccgacgtggctgatgaggtt
aggaggtcgaagaagacaaaatgctcaactgatgaagcttgtgatgcactaactgatggt
ggggtgaatatccacgagaaagatgtgggcgagagctgcaagcagagtgaacgtgaaagc
gttgtcgaaaacatagttgaagacaatgataaatgcctaaagttacacccacgggaaaag
aaaataattgacttcagggataagctttatcttgctccgctgactacagttggaaatctg
ccgtttcgccgggtttgcaagggtctgggtgttgatattacatgtggcgagatggcaatg
tgcaccagtcttttacagggccaagcttcagaatgggctttactgaggcggcattcttca
gaggatttctttggtgttcagatctgtggggcgtttccagatactgttgctagaactgtc
gaacttatagatgataattgcacactggatttcatcgatattaacatgggatgtccaatt
gatattgttgtcaacaagggtgctggatctgccctcctcacgaaaccaatgcgaatgaaa
agtgtggtagaggcttcctctaaagcagtctctacaccactgactctcaaggttcggacg
ggttattttgagggtaagaatcgtattgactctctgatagcagacatgggaaactgggga
accactgcagtaacagtacatggtcggacacggcaacagcgctactacaagcttgctgat
tgggaatatatataccagtgtgcacgagcagccccttctaatctgcaagtccttggaaac
ggtgatgtttactcatatttggactggaacgctcacaagtctgactgtcctgagctgtca
acatgtatgattgctcgaggagcactggttaagccttggatattcaccgaaatcaaggaa
cagaggcactgggacattacatccggagagcggctcaacattttgaaggattatgtacgt
ttcggccttgaacattggggttctgactcaaaaggagtggagacaacgaggcatttcttg
ctggagtggctgggctacacttgcagatatattccggtcggtctcttagatgttatcccc
ccaaagataaactggcgggcaccatcatatttcggacgtgatgatcttgagacattaatg
ggctccgactcagctgctgactggattaggttaacggagatgttgcttggcaaggtgcct
cctggcttcacttttgctcccaaacacaaatccaatgcgtatgataaagcagaaaatggt
taa

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