Salvia hispanica (chia): 125186826
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Entry
125186826 CDS
T09851
Name
(RefSeq) small nuclear ribonucleoprotein E-like
KO
K11097
small nuclear ribonucleoprotein E
Organism
shis
Salvia hispanica (chia)
Pathway
shis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125186826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125186826
03041 Spliceosome [BR:
shis03041
]
125186826
03032 DNA replication proteins [BR:
shis03032
]
125186826
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
125186826
Spliceosome [BR:
shis03041
]
Complex A
U1 snRNP components
Sm proteins
125186826
U2 snRNP components
125186826
Complex B
U1 snRNP components
125186826
U4/U6.U5 tri-snRNP components
125186826
Complex C
U2 snRNP components
125186826
DNA replication proteins [BR:
shis03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
125186826
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
125186826
NCBI-ProteinID:
XP_047939239
LinkDB
All DBs
Position
5:complement(16583803..16584776)
Genome browser
AA seq
88 aa
AA seq
DB search
MASTKVQRIMTQPINLIFRYLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDEAEEV
NIKKNSRKQLGRILLKGDNITLMMNTAK
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggctagcactaaagttcagcgtattatgacccaaccgattaacctcatctttaggtat
cttcagagcaaagcgcgcattcagatttggctgtttgagcagaaggatctgaggatcgag
ggtcgaatcatcggattcgacgagtacatgaatttggtgctggatgaagctgaggaggtc
aacatcaagaagaacagcaggaagcagctcggtaggattttgttgaaaggggataacatc
accttgatgatgaatactgccaaatga
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integrated database retrieval system
