Salvia hispanica (chia): 125187091
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Entry
125187091 CDS
T09851
Name
(RefSeq) PHD finger protein MALE MEIOCYTE DEATH 1-like
KO
K26271
PHD finger protein MS1/MMD1
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shis03000
]
125187091
Transcription factors [BR:
shis03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
125187091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
125187091
NCBI-ProteinID:
XP_047939565
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All DBs
Position
1:11713757..11717975
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AA seq
692 aa
AA seq
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MDFPVFESHSKIPPKFYGFHTFAEPGCPISLTGAFRDNIRRFLQECASLEDHDLAGMPIW
RTFLVYESKGTVIPLYTVEEKVEDSDRPFCDYCRSVGWSHHFVSKRKYHLIIPANEEWDD
PIDEGVFDLQTHLLHGLIHCNGFGHLICINGIEGGSKFICGREIMDLWDRICMTLSVRQV
TVEDLSKKHKMELRLLHGVSYGHSWFGKWGYRFCHGSFGVKEHNYESAINLLSSLELDRV
IQKFSCVKAGFDLQQMIQYYRNMGGNNLVTVRDLFRFMFTVKSTTPTTRYSTTVASWPER
NKVTVTTHIRRCSSKFPTKLALTTSSFRKEKPTKCRKFSNVAAKMDSRWPVRRLEHVAEV
IAEALKEKRAAKNTGSSGMTRQEARDAARLHIGDTGLIDHVLKAMNNVIVGDHIVSRSVN
RSTKVLEYTIQDLKCDDEKLFCPSKIEKPVWTCCLGPGRSVYNDIAYLYKNVLLGYPECE
SVESAAQIILHSKHFVKEFPFRDDDAESLMFICILILSSVDLKADLSYEFTAMEHVDVPL
YATVGDLKMAVEDAFRDTYCVLERLQVTDILELEEVEDGEVLFGVVQSGMELHVKGHGSD
MESSLRYEGGTESWTVRCKCGARDDDGERMVACDICEAWQHTHCCGIGEAETVPRLFVCE
ACCTSLVTMHRTCGSTNDYEACEGSFVEESFA
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggattttccagttttcgaatcgcactccaaaattccacccaaattctacggcttccac
acctttgcagagcccggctgccccatttctctcaccggtgccttccgagacaacattcgc
cgcttccttcaagagtgcgcctccctcgaggatcatgacctcgccgggatgccgatttgg
cgcacgtttctggtctacgagagtaaaggcacggtcatccccctttacaccgtcgaagaa
aaggtagaggattctgaccggccattctgcgattactgccgctcggttggatggagccat
cacttcgtgtcgaagaggaaatatcacctgataattccggcgaacgaggagtgggatgat
ccgattgatgaaggcgtttttgatctacaaactcacctcttgcacggcttgatccattgc
aatgggtttggccatttgatctgtataaatgggattgaaggtggttccaaattcatatgt
ggtagagagataatggatttatgggatcgtatctgtatgactcttagtgttaggcaagtt
acagttgaggatttgtcgaagaagcacaaaatggagcttcggttgctgcatggagtttcc
tatggtcactcctggtttggtaaatggggttaccggttctgccatgggagtttcggtgta
aaggagcacaattatgaaagtgccatcaatctgctcagctcgttggagcttgatagagta
attcagaaattcagttgtgtgaaggcaggctttgatctacagcagatgatccagtattat
agaaacatgggtgggaacaatttggttacagttagagacttgttcagattcatgttcacg
gtaaagtcgacaactccaaccacaagatattccaccacagttgcatcatggcctgagaga
aataaagtcactgtcactacccatatcagaagatgttcatcgaagttccctactaagctt
gctctcacgaccagctcgttcagaaaggagaagcccacaaagtgcagaaaattctccaat
gttgctgcgaagatggatagtagatggccggttagaaggctcgagcacgttgcagaggtc
attgctgaagcactgaaggagaagcgagcagcaaaaaacactggcagcagcgggatgact
aggcaagaggcgcgtgatgcagcacgcctccacattggtgatacggggttgatagatcac
gtcctcaaggcgatgaacaatgtcattgtcggggatcacattgtgagccgttcagtgaac
agatccacgaaggtgctcgagtatacgattcaagatctcaagtgtgatgatgagaaactg
ttttgcccctcaaaaattgagaagccggtttggacatgttgtcttggtcccgggaggagc
gtctacaatgacatcgcatacctatataagaatgtgttactcggctatccagagtgtgaa
tctgtggaatctgctgctcagataattcttcacagtaaacactttgttaaggagttccct
tttagggatgatgatgctgagtcattgatgttcatttgcatactgattttgagttcggtt
gatctcaaagccgatctctcttatgaattcacagctatggagcatgtcgatgttccacta
tatgctacagtaggtgatctcaagatggcggtggaggatgcgtttcgtgatacatactgc
gtgctggaaaggctacaagtgacagacattttggagcttgaagaagtggaggatggggaa
gtcctgtttggggtcgttcagtcggggatggagcttcatgtgaagggacatggatcggac
atggagagtagcttgagatacgaaggcgggacagagagctggactgtaagatgcaagtgt
ggggcgagagacgatgatggggaaaggatggttgcctgtgatatatgtgaggcgtggcag
cacacgcactgctgtggcatcggagaagctgagaccgtgccaaggctgttcgtatgtgag
gcgtgttgtacctcacttgtaacgatgcacagaacatgtggctcgactaatgactacgag
gcgtgtgagggctcctttgttgaagagtcatttgcctga
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