Salvia hispanica (chia): 125187114
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Entry
125187114 CDS
T09851
Name
(RefSeq) myosin-17-like
KO
K10357
myosin V
Organism
shis
Salvia hispanica (chia)
Pathway
shis04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
125187114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125187114
04131 Membrane trafficking [BR:
shis04131
]
125187114
03029 Mitochondrial biogenesis [BR:
shis03029
]
125187114
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
shis04812
]
125187114
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
125187114
mRNA cycle factors
P-body specific factors
125187114
Membrane trafficking [BR:
shis04131
]
Others
Actin-binding proteins
Myosins
125187114
Mitochondrial biogenesis [BR:
shis03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
125187114
Cytoskeleton proteins [BR:
shis04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
125187114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
nSTAND3
AAA_16
TSC22
AAA_22
CbiA
Sec10_N
IQ_SCN5A_C
ABC_tran
Motif
Other DBs
NCBI-GeneID:
125187114
NCBI-ProteinID:
XP_047939592
LinkDB
All DBs
Position
5:complement(13838326..13854578)
Genome browser
AA seq
1527 aa
AA seq
DB search
MGSPVNITVGSHVWVEDPALAWVDGQVSRINGQDVHVKTKNGKQVVANISKVFPKDTEAP
PGGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQY
KGAALGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRS
GVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAVRTYLLE
RSRVCQISDPERNYHCFYLLCAAPPEEREKYKLGSPESFHYLNQSKCYKLDGVSDAEEYL
ATRRAMDIVGISEDEQEAIFRIVAAILHLGNIEFSKGKEIDSSVVKDEKSRFHLNTTAEL
LKCDPKSLEDALIKRVMVTPEEIITRTLDPEAALGSRDALAKTVYSRLFDWIVEKINISI
GQDRNSKAIIGVLDIYGFESFKQNSFEQFCINYTNEKLQQHFNQHVFKMEQEDYEKEQIN
WSYIEFVDNQDVLDLIEKKPGGIISLLDEACMFPKSTHETFAQKLYQTFSKNKRFIKPKL
SRTNFAISHYAGEVLYMADLFLDKNKDYVVAEHQDLLTASKCSFAAGLFPPSPEESSKSS
KFSSIGSRFKLQLVSLMDTLNSTEPHYIRCVKPNNVLKPAIFENVNIIQQLRCGGVLEAI
RISCAGYPTRRLFDEFLLRFGVLAPEVLDGNIPDKAACQMILDKMRLEGYQLGKTKVFLR
AGQMAELDTRRAEVLGNAAKTIQRQIRTYIARRDFVVLRRAAIQLQSCWRAISACNFYEQ
LRREAAALKIQKNFRCYTARISYKALQNSAIIVQTGMRAMTARGEHRFRKQTKAAIKIQA
HARGHREYSYYKSLQKAAIVTQCGWRQRVARKELRKLRMASRETGALKEAKDKLEKKVEE
LTWRLQFEKRLRTELEETKAQEITKLQEALHSMQIQVEEANARVIKEQEAARKAIEDAPP
VIKETPVVVQDTTKIDALTAEVESLMALLLLEKQAAEEAKKVCAEAESKNVDFAKKLEEA
AGKVDQLQDSTQRLEEKLSNLESENQVLRQQALTMSPTGKTMPARTRTAIIQRPQENGNI
HNAETKPNYDTALVVASPKEPESEEKPQKSLNEKQQENQDLLVKCISQDLGFAGGKPVAA
CLIYKSLLHWRSFEVERTTVFDRIIQSVASSIEVPDNNVVLAYWLCNTSTLLMLLQHTLK
ASGAASLTPHRRRSSSASLFGRMSQGLRTSPQTPGVSFLNGRMLGRLEDVRQVEAKYPAL
LFKQQLTAFLEKIYGMIRDNLKKEISPLIGLCIQAPRTSRSSLVKGRTQANAVAQQALIA
HWQSIVKNLNNYLKIMKANYVPSILVRKIFTQIFSFINVQLFNSLLLRRECCSFSNGEYV
KSGLAELEQWCSNATEEYVGSAWDELKHIRQAVGFLVIHQKPKKTLNELTNELCPVLSIQ
QLYRISTMYWDDKYGTHSVSADVISSIRVMMTEDSQNSVNSSFLLDDDSSIPFSVDDLSK
TMPQVDVADVEPPPLLRENSGFVFLLQ
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atgggatcaccagttaatatcacagttggttctcatgtatgggttgaggatcctgccttg
gcatgggttgatggacaagtgagccggataaacgggcaagatgttcatgtgaaaactaaa
aatgggaaacaggttgttgcgaacatctctaaagtatttccgaaggatactgaagcacca
cctggaggtgtggatgatatgactaagctttcatatcttcatgaaccaggggtcctgcaa
aacctggcgacaagatatgaactaaacgaaatatatacttatactggaaatattctgatt
gctataaaccctttccaaagattaccccatctgtatgatactcacatgatggagcaatac
aaaggggcagcacttggagagctaagtcctcatgtttttgcaattgcagatgttgcttac
agggcaatgatcaatgagggaaagagcaactccattttagttagtggagaaagtggtgct
ggtaaaactgaaacaactaagatgctcatgagatatcttgcatatttgggtggtcggtct
ggagtagaaggacgaaccgttgaacaacaagttctagagtcaaacccagttcttgaagca
tttggaaatgccaaaactgtcaggaacaataactcaagtcgttttggtaaattcgttgag
atccaatttgacaaaagtgggaggatatctggagccgctgttagaacttacttgctggag
agatctcgcgtttgccagatttcagatcctgaaagaaactaccattgcttctatcttctc
tgtgcagcaccacctgaagaaagagagaaatacaagcttggaagcccagaatcattccac
tatctaaatcaatccaagtgttacaaactcgatggagtaagtgatgctgaagaatacctt
gcgactcgaagggctatggatatagtcggaataagtgaggatgagcaggaggcaatattc
aggatagttgctgcaattcttcatctaggtaatattgagttttccaaggggaaggagatt
gattcttcggtagttaaggatgagaagtcgaggtttcatctcaacacgactgctgaatta
ctcaagtgtgatccaaagagcttggaagatgcacttattaagcgagttatggtgacacct
gaggaaattatcaccagaactcttgatccagaagctgcattgggtagccgagatgctttg
gcaaagactgtatattctcgactttttgactggattgtggaaaaaataaatatctccatt
gggcaggatcgtaactccaaagcaataataggagttcttgatatatatggttttgaaagt
tttaagcaaaacagttttgagcagttttgtatcaattatacgaatgaaaaattgcagcag
cattttaaccagcacgtctttaagatggaacaagaagattatgagaaagaacagattaac
tggagctacattgagtttgttgataaccaagatgttttagatctaattgagaagaaacca
ggaggaataatttcgttgctagatgaagcttgcatgtttcctaaatctactcatgaaaca
tttgctcagaagttgtatcagacttttagcaaaaataagcgcttcatcaaacccaaactc
tcgcgtaccaattttgcaatatctcactatgcaggagaggtgttatacatggcagatctt
ttcctggacaagaacaaagattatgtggtggcagaacatcaagatttattaacagcttca
aaatgctcttttgcagctggtttatttcctcctagtccagaagaatcatcgaagtcttcc
aagttttcatcaataggatcacgctttaagctgcaacttgtatctttaatggatacactg
aattcaacagaacctcattacatcagatgtgtgaaaccaaacaatgtcctgaagcctgcc
atttttgagaatgtcaacattattcagcaactgcgatgtggtggtgttctcgaagctatc
agaatcagttgtgctggataccccaccagacgtttgtttgatgagtttcttctgcggttt
ggtgttcttgctcctgaagttttagatgggaacattcctgacaaggctgcatgtcagatg
atcttggataaaatgagattagaggggtatcagctaggtaagacaaaggtcttccttcga
gctggtcagatggctgaactagatactagaagagcagaagttcttggaaatgcagccaaa
acaattcaaaggcaaattcgtacttatattgctcggagagattttgttgtattgaggaga
gctgcaatacaattacagtcatgttggcgagctatttctgcttgcaatttctatgagcaa
ttgcgacgtgaagctgctgctcttaagattcagaagaacttcagatgctacactgcccgg
atatcttacaaagcattgcagaattctgctatcatagtgcagactggcatgagggcaatg
accgctcgtggcgaacatagattcagaaaacagaccaaggctgcaattaaaattcaggct
catgcacgtggtcacagagaatattcgtattataaaagtctccaaaaggctgctattgtt
acacaatgtggttggaggcaacgtgttgcccgcaaagagctccgaaagcttcgaatggct
tctagggaaacaggagccttaaaagaagcaaaagacaagctagaaaaaaaagtagaggag
cttacctggcgcttgcagtttgagaagcgattaaggaccgagttggaggaaacaaaagca
caagaaattactaagttgcaggaggcattacattcaatgcaaatacaagtggaagaagca
aacgctagggtgataaaagaacaggaagcagctcgcaaggcaatcgaagatgcaccacca
gtcattaaagaaaccccagttgtggtccaagacacaacaaagattgatgcattaacagcc
gaggtagaaagtctcatggctttgctgcttttggagaaacaggctgcagaagaggctaaa
aaggtctgtgcagaagctgaatccaaaaatgtggattttgctaaaaagttagaggaggct
gctggaaaagtggatcagcttcaagattccacgcaaagacttgaagagaagctatcgaac
cttgagtcggagaatcaagtacttcgtcaacaagccctaaccatgtcacctacagggaaa
actatgcctgcaagaaccaggacagctatcattcagagacctcaggagaatggaaatatt
cacaatgcagaaacgaagcctaattatgatacagctcttgttgttgcatctccaaaggaa
cctgaatctgaagaaaaaccgcagaaatctctcaatgaaaagcagcaagaaaatcaagac
cttctggtgaaatgtatatctcaagatctgggtttcgctggtggcaaacctgtcgctgct
tgtcttatttacaaaagccttcttcactggaggtcatttgaggttgagaggacaactgtg
tttgaccgcataattcagtctgtagcttcgtccatagaggtccctgataacaatgtcgtt
ctagcctactggttatgtaatacatcgactctgttaatgctgcttcaacatacactcaaa
gcaagcggggcagctagcttaaccccccacagacggaggtcatcatcagcttctcttttt
gggaggatgtcacaaggattgaggacctcacctcagactcctggagtgtcgtttctgaat
ggtcggatgcttggtagactagaagatgtgaggcaagtagaagccaagtatcccgccttg
ttgttcaagcagcagcttactgcttttctggaaaaaatatatggaatgatcagagacaac
ttaaagaaagaaatttctcctttgattgggttatgtatccaggctcccaggacatctcgt
tcaagtttagttaaaggccgtacccaagctaatgctgttgctcaacaagcactaattgct
cattggcagagcattgtgaaaaatctaaacaattacttgaagatcatgaaagcaaattat
gttccatctatcctggtccggaagattttcactcaaatattttctttcatcaatgtccaa
ttattcaacagccttcttttacggcgcgaatgttgctcattcagcaatggggagtacgtc
aaatcagggctggctgaattagaacaatggtgctctaatgcaaccgaggaatatgtaggc
tcagcttgggatgaactgaagcatattagacaggcagttggatttttggtcattcatcaa
aagcccaagaaaaccttgaatgaacttacgaatgaactttgtcccgtgctaagcattcaa
cagctatacaggattagcaccatgtactgggatgataaatatggcactcatagtgtttct
gcagatgtcatttcaagtataagagttatgatgacagaggactctcagaattcggttaac
agttcctttttgttggatgacgactcgagcattcccttctctgttgatgacctctccaaa
accatgccacaagtagatgtggctgatgtggaacctcccccgttactccgtgaaaactcg
ggattcgtatttttacttcaatga
DBGET
integrated database retrieval system