Salvia hispanica (chia): 125187120
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Entry
125187120 CDS
T09851
Name
(RefSeq) pumilio homolog 2-like isoform X1
KO
K17943
pumilio RNA-binding family
Organism
shis
Salvia hispanica (chia)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NABP
PUF
PUF_NOP9
DUF445
Motif
Other DBs
NCBI-GeneID:
125187120
NCBI-ProteinID:
XP_047939601
LinkDB
All DBs
Position
5:24784643..24790542
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AA seq
1050 aa
AA seq
DB search
MLPEMGRRPIVGNGESSYPDEFEQEIGMLLREQRRQEADDLEKELNLYRSGSAPPTVEGS
LSAVGGLFNHGASGGTAESGAGVSAAIAEFARNKNGNGFMSEEELRSEPAYLSYYYSNVN
LNPRLPPPLLSREDWRFAQRLQGGSSAIGDKRKVNRSDSGNGGRSLFSMPPGFNSKKQES
ENEDKLQGPVEWGGDGLIGLPGLGLGSKQKSLAEIFQDDMNRATPVPGHPSRPASRNAFD
ENSSAMASTEAELAHLRRELSSSDLVHSTSYTPTSSAPQHTGTAASFSYAAVLGASLSRS
STPDPQRIARAPSPCPTPIGGGWGGNSEKRNINSPNSFNGVASHSNEPADLAVALSGLNL
SNGIVDEENHSSSQIESEADDHNNYSFNLQGGQNNTRQQSYKKKHEAGPYNMSAVPQAGK
IMPSDSGMRNGGGSDLSGNHSFQSELHRNVVPSNNSYLQVSPNAAANGGGGGFSQYQHLD
SPNSSFSNYGLSGYPMSPISGQLGGSNLPPLFENAAAASAMAVPGMDSRMLGGSNMGAAA
EHSLGRLGNQVLGSALQAPFVDPLYQQYLRTAEYSAQVTALNDPSFDRNYMGNSYMDLLQ
KAYVANMISPQKSQYGAPLGGKTGVSSPHGYYGNPAFGLGVSYPGSPLASSVIPNSGGPG
SPLRHGDFNVRFPGGLRNVPGSIIGPWSLDNMDSTFASSLLEEFKSNKAKCFELSEIVGH
VVEFSADQYGSRFIQQKLETATIEEKNMVFEEIFPQALALMTDVFGNYVIQKFFEHGMAS
QRRELADKLFGHVLNLSLQMYGCRVIQKAIEVVDVDQKIKMVGELDGHVMRCVRDQNGNH
VIQKCIECVPEEHIQFIVSTFYDQVVTLSTHPYGCRVIQRVLEHCKDETTQSKVMEEILG
SVSMLAQDQYGNYVVQHVLGHGKPHERSTIIQELAGNIVQMSQQKFASNVVEKCLTFSDP
SERQLLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCSDQQRELIMSRIRVHLNALK
KYTYGKHIVARVEKLVAAGERRIAAQTPIA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgttacccgaaatgggtaggaggccgattgttggaaatggtgaaagttcatatccggat
gagtttgagcaggagatagggatgttgctccgtgaacagaggaggcaagaggctgatgat
cttgaaaaggagcttaatctgtatagaagtggatcagctccaccgacagtggagggttca
ctaagtgcagttggtgggttgttcaaccatggggccagtggtggcactgccgaaagtgga
gctggtgttagtgcagcaattgctgagtttgcaagaaataagaatggtaacgggttcatg
tccgaggaggagcttaggtctgaacctgcgtatttatcttactattactcgaatgttaat
ttgaacccgcggcttccgcctcctctgttgtcaagagaggattggcggtttgctcagagg
ctgcaaggagggagttctgctattggggataagaggaaggtgaacaggagtgacagtggc
aatggtgggagatccctcttttcaatgccccctggttttaattcgaagaagcaagaaagt
gagaatgaggacaaactgcagggtcctgtagagtggggtggtgatggacttattggtttg
cctggattaggacttggtagcaagcagaagagccttgcagagatttttcaggatgacatg
aaccgtgctactcctgttcccggacacccttctcgccctgctagcagaaatgcttttgat
gaaaattctagtgctatggcttcaacagaggctgagttagctcatctgcgtcgggaattg
tcttcatctgatctagtacactctacttcatatactccgacctcatctgctcctcagcac
acaggaacagctgcgtcattctcttatgctgctgtcttgggtgcatccttgtcaagaagc
tcaactcctgatcctcaacgcatcgcaagagcaccaagtccttgcccaactcccattggt
ggaggctgggggggaaattccgagaaaagaaacataaatagtcctaactctttcaatggt
gtagcttcccattccaatgaacctgctgatcttgcagttgctttatctggcttgaacctt
tcaaatggtatcgtggatgaggagaatcattcatcctcccagattgagtcggaggctgat
gaccacaataattattcttttaatcttcagggaggccaaaataacactaggcaacaatct
tataagaagaaacatgaagctgggccatataatatgtctgctgttccccaggcaggtaaa
ataatgccttctgattctggtatgagaaatggaggtggatcagatttaagtggtaatcat
tcttttcaatctgagctgcacagaaatgttgtcccttctaataattcatacctacaagtt
tctcctaatgctgcagctaacggtgggggtggtggattttctcagtatcagcatctggat
agtcctaactcatcattttcaaattatggattaagtgggtaccctatgagtccaatatca
ggtcaacttggtgggtctaatttgccaccattgtttgaaaacgctgctgctgcatcagct
atggctgtacctgggatggactctaggatgttggggggatcaaatatgggtgctgctgct
gagcatagccttggaagattaggaaatcaggttctgggtagcgccctgcaggcacccttt
gtcgaccctttgtatcagcagtatttgagaaccgctgaatattctgcacaagtaaccgct
ctcaatgatccttctttcgataggaactatatgggtaactcatacatggacctgctccag
aaagcctatgttgcaaatatgatatctcctcagaaatctcaatatggtgctccattgggt
ggtaaaacaggtgtatctagccctcatggttactatgggaatcctgcttttgggctcgga
gtgtcatatcccggaagtcccctggctagttcagtaattcctaattctggaggccctggt
agccctctaaggcatggagacttcaatgtcagattccctggtgggttaagaaatgttccc
gggagcataattggaccctggtccttggataacatggatagtacttttgcttcttcactg
ctggaagagttcaagagcaataaagcaaagtgctttgaactttcagagattgtcggtcat
gtcgttgaattcagtgctgatcaatatggaagccgattcattcaacaaaagcttgaaact
gcaacaatagaagagaagaacatggtttttgaggaaatttttccacaagctcttgcatta
atgactgatgtgtttggtaattatgtaatacaaaagttcttcgaacatggtatggcatct
caacgaagagagctggctgacaagctttttggtcatgtacttaatctaagcctccaaatg
tatggttgtagggtgatccaaaaggcaatagaagttgtcgatgtggatcaaaagatcaaa
atggtgggggagctggatgggcatgtcatgcgttgtgttcgtgatcagaatgggaatcat
gttatccagaagtgcatcgagtgtgtccccgaggagcatattcagtttattgtctcgaca
ttctatgatcaagttgtgaccctctcgacgcacccttatggttgccgtgtgatacagcga
gttttagagcactgtaaggatgaaactacccagagcaaagttatggaagaaattttggga
tctgtaagtatgctggcacaagatcagtatgggaactacgttgttcagcatgtactgggg
catggaaagccacacgagcgatcaaccatcattcaggaattagctgggaatattgtccag
atgagccaacagaagtttgcatcaaatgttgtcgaaaaatgcttaacatttagcgatcct
agtgaacgccaactgttggtgaatgagatgcttggaacaactgatgagaatgagcctctt
caggccatgatgaaagaccaatttgcaaattacgttgtacagaaagttttagaaacttgt
agtgatcagcagcgtgaactgatcatgtcaagaataagagtccatttgaacgcattaaag
aaatacacatatgggaagcacatagtagcccgtgtggagaaacttgttgctgctggggag
aggagaattgctgctcagaccccaatagcgtag
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integrated database retrieval system
