KEGG   Salvia hispanica (chia): 125187176
Entry
125187176         CDS       T09851                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
shis  Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:shis00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:shis04121]
    125187176
Enzymes [BR:shis01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     125187176
Ubiquitin system [BR:shis04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    125187176
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-C3HC4_4 zf-rbx1 zf-RING_10 zf-ANAPC11 Prok-RING_4 Rtf2 zf-RING_4 zf-Nse TRAF3_RING zf-RING_11 zf-RING_6 Zn_ribbon_19
Other DBs
NCBI-GeneID: 125187176
NCBI-ProteinID: XP_047939662
LinkDB
Position
5:complement(39769534..39771660)
AA seq 214 aa
MSNAQEIRMYSRARSRRRTLDVDLNALPPSHEIGEQGVVSHHTRSHGRQEAGRSATALPP
PIDVEALDDDVIISSPTAFAEAKNNARRNRGRTVVVDVDNDDRASRNKRRRVPTNQTIIN
CDLYINLESSSNSSRESGKSAAVPIPPVPPKEPTFSCPICMGPLVEEMTTKCGHIFCKAC
IKASIAAQGKCPTCRRKTTTRDIIRVYLPSTRTA
NT seq 645 nt   +upstreamnt  +downstreamnt
atgagcaatgcacaggaaattaggatgtattcaagggctagaagtaggagacggacactg
gatgttgatctcaatgctttaccaccgtcacatgaaatcggggagcagggtgttgtttcg
caccatactaggtcccacggtaggcaggaggctggaagaagtgccaccgccctgcctccg
ccaattgatgtagaggcgcttgatgacgacgttattatctcttcgcctacggcatttgca
gaagccaagaacaacgccagaaggaaccgtgggcggactgtcgtggttgatgtggataat
gatgacagagcatctcgcaacaagcgcagaagggttcctacaaaccagacaattataaac
tgcgacctttacataaacctcgaaagcagtagcaactcatcgagggaaagtggcaaaagc
gctgcagtgcctatacctcccgttccaccaaaggagccgacattcagctgccccatttgt
atgggcccgctagtcgaagagatgacaacaaaatgtggccacattttctgcaaggcgtgc
atcaaagcttccatagctgctcaggggaaatgtccaacgtgccggagaaaaacgacgacg
agagacattattagagtgtaccttccctcaactagaactgcttga

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