Salvia hispanica (chia): 125187278
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Entry
125187278 CDS
T09851
Name
(RefSeq) autophagy-related protein 18c-like isoform X1
KO
K22991
WD repeat-containing protein 45
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125187278
Membrane trafficking [BR:
shis04131
]
Autophagy
Other autophagy associated proteins
Others
125187278
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_THOC3
Beta-prop_IFT122_1st
BCAS3_WD40
WD40_CDC20-Fz
WD40
Beta-prop_WDR5
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_IFT140_2nd
WDR55
Beta-prop_Vps41
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RSE1_2nd
CFAP251_N
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
125187278
NCBI-ProteinID:
XP_047939789
LinkDB
All DBs
Position
5:32296018..32302760
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AA seq
406 aa
AA seq
DB search
MTSTDSASPAIHPWEGCGLHEAPMDPLQPEPQLNDNEETELYSVSWNQDSGCFAAGTSHG
FRIYNCNPFKETFRRDLKTGGFKIIEMLFRCNILALVGTKVNTQYPPNNVIIWDDFQSRC
IGEFSFRSEIRAVKLRRDRVVVVLEHKIYVYNFMDLKLLHQIETLANPRGLCCLSHHPNT
SVLACPGLQRGQVRVEHFGLNRTTLINAHDSKIACLTLTMDGLLLATASLRGTLIRIFNT
LDGTRLQEVRRGVDRADIYNIALSPNVQWLAVSSDKGTVHIFSLRVRGFGDHRSTDSTAA
TGPISYNQSSSNALEPLITRSTSANPSSSFSFLKGVLPKYFSSEWSFAQFHFPGVTQFIT
TFGSQNTVIVVGLDGSFYRCSFDPVNGGEMVKQEYVRFLKTEAASQ
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaactgattcagcatctcctgcaatacatccatgggaaggatgtggtctccat
gaggcaccaatggatccacttcaaccagaaccacaattgaatgacaatgaggaaactgag
ttatactcagtgtcctggaaccaagactctggttgctttgctgctggcaccagtcatggt
ttccgcatatataattgtaatccttttaaggaaacattcaggcgtgatttaaaaactggg
gggtttaagataatagagatgcttttcagatgcaacatcttagcacttgttggaactaaa
gtgaatactcaatatcctccaaacaatgttattatctgggacgattttcaaagcagatgt
attggtgagttttcatttagatctgagattcgtgcagtcaaactaagacgggaccgtgtt
gttgttgttcttgagcacaagatatatgtttacaattttatggatctgaaacttcttcat
caaatagagactttggcaaatccaagaggtctttgttgtctgtctcatcacccaaataca
tctgtgttggcatgtcctggtctgcaacgaggacaggttcgagttgaacattttggcctg
aataggacaacgttaatcaatgctcatgattctaagattgcatgtttgaccttgacaatg
gatgggcttcttcttgcaactgccagtctgagaggaactttaataagaattttcaacaca
ttggatggaacgcgattgcaagaggttcgcagaggggtagacagagcagatatatacaac
attgctctgtctccaaatgtgcagtggttggctgtatcgagtgacaaaggtactgttcac
atatttagtcttagagtgcggggatttggcgatcaccggtcaacagattccactgctgct
acaggtccaatatcatataaccaaagttcatccaatgcacttgagcccttaatcactcgt
agtactagtgctaatcccagttcgtccttttctttcttgaaaggggttctacccaagtat
tttagttcggaatggtcatttgctcagttccacttccccggagtcacccagttcattacg
acatttggttctcaaaacactgtcatcgttgtaggcttggatgggagcttctaccggtgc
agctttgatccggtgaatggaggagaaatggtgaagcaggagtatgttcgctttctgaaa
actgaagccgcatctcagtag
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integrated database retrieval system
