Salvia hispanica (chia): 125187334
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Entry
125187334 CDS
T09851
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shis03021
]
125187334
Transcription machinery [BR:
shis03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
125187334
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_N
Med13_C
Motif
Other DBs
NCBI-GeneID:
125187334
NCBI-ProteinID:
XP_047939857
LinkDB
All DBs
Position
5:8868750..8883901
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AA seq
1969 aa
AA seq
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MWTNIFKIGGLHRISWFQFLPNEFDFSALPDKSVKVDPKDAAMSAVLSAHLQLQKEGFLS
AWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGQHSSINEKAQHAVAKLRVLASGFWVSPGD
SEEVASAISQALRNRIERALRGFSYIRFGDVFSKYQPFTQNEELFRRGQPVAEFIFAATE
ETIFVHVIISAKHVRALSNGDIEPFLSSSSRHTNDQISVVVSPHGMRGKLTGCCPGDLVK
QVFLSSGKFRDPNGTSGLPFKVARGSGLPTQQRGQNCFVEVTLGCQEKLVRDSANLHSNS
SQPHGTESPASKICNQRWPLDKLPICEKKFVYPTEAVLVPVMQTSFARSSLKRFWLQNWA
GPSLSASSLVMHCFDFGSDDKVDSMDGSSLEPSGTRSYHGYRSSSNSNSSSYGSMSSSSS
DSDRKVLGTRDLEADADSLMSRQSGLSSLGQMQNDVLQLGSKRPRSGTSESFGQAGMVLN
PSMTDYGTMEANISINGAANENVGSQWGWDDDDRGMGMDIQALLSEFGDFGDFFENDALP
LGEPPGTAESQVLMFPAPDGGELCSSPSTSVMDVPDRMLVSTGFPTFDNFNQLNAPDSVE
DSVIKNQETTKSSAPSQVTCMLPSSNIEFDHVVKAEALMSFAPEYGGVEAPNSEISSVIF
RSPYIPRSCKVDSASSSSHYVYSATPPSPCCNGSHEKSTLPSEKACTEKKELCSAFKSKK
YYTHVERGKQQTGASHNSLSKSEVGGSSAQFFGLSQADVKPISAKASDSSQKGDNCLPSA
RTVLATETECLVCQVSMCRLRHTLLSSSNISSSSLSGLSCSSTQNLGHNDSSTMVDNMSC
KSELKKKESIPVRIAGDVDGGMLDGSLTAPVGVWRSVGIPKVAKTGSSNMEVCPSIPHNS
FMEESMLSYGLRQPLQELLDGIAFLVQQATSFVDVALDADCGDGPYGWLALQEQRRRGFS
CGPSMVHAGCGGLLASSHSLDIAGMELVDPLSVDVQASLTIGLLQSDIKEALKSAFSNAD
GPLSVMDWCRGRNPSNESAMTYDGHSAESIASASECRDSSSTVTLSVGDPMSPSLTSAGG
ASGLKGDGTRGDDGGTSLMESDQQHCSRIRPTLSVVPFPSILVGYQDDWLKTSAGSLQLW
EKAPLEPYATVKHMSYYVVCPNIDPLTTAATDFFLQLGTVYETCKLGTHAPQSLGNEMDI
DSKKISPGFALLDCPQSMKIDTNNASMLGSISDYFLFLSNGWDLTSYLKTLSKVLKTLKF
GSSVPVNSKEGNGGPCTVVYVVCPFPEPLAVLQTVVEASIAIGSVIRSSDKERRSMMHNQ
VAKALSYPASVDESFSNVLTLTGFSIPKIVLQIVTVDAIFRVTSPKLNELIILKEIAFTV
YNKARRISRGASGETMSSLSVPGASHSVLMQMSPSVPGMWKDCVGSRIGGPPLQRESELD
TSMRQGAWDNSWQTVRSGGIGADPSRTGDIFPLDDIRCLFEPLFILAEPGSIERGLSPFF
GNSADSLKLSDDCTSTSFVQNSTSAVTGDNGPVSQHDSLDSDGLTSGHQKSIPSLHCCYG
WTEDWRWMVCIWTDSRGELLDSCVYPFGGISSRQDTKGLQSLFVQILQQGCQILQACSPD
AGVAKPRDLVITRIGCFFELECQEWQKALYSAGGSEVKKWSLQLRRSLPDGMPAGSNGNS
LQQQEMSLMQERALPSSPSTLYSPHSKSSSFMKGGIAQPSSRKQLMGGHAVLDNSKGLLQ
WVQSISFVSVSIDHSLQLVLQADSSPGSSQGSATSGLSGYLEGYTPVKSLGSTSASYLLV
PSPSMRFLPPSVLQLPTCLTADSPPLAHLLHSKGSAIPLSTGFVVSKAVPSMRRDARSLS
KEEWPSVLSVSLIDYCGGNVVSQEKSGKGANKPVGRGVSSESKDIEVETHIILDTIAAEL
HALSWMTASPAYLERRSALPFHCDMVLRLRRLLHFADKERSRLPEKAPT
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atgtggacgaatatattcaaaatcggaggtttgcatcggatatcatggtttcagtttctt
cccaatgaatttgatttcagcgctctacctgataagagtgtgaaggtggacccgaaagat
gcagcgatgtcggcagtgctctcagcacatctgcagctgcagaaggaagggtttctcagc
gcatggactaactctttcgttggaccctgggatccttctcagggtctgcataatcctgat
gagaagattaagctttggctttttctccctggtcaacactcctctatcaatgagaaggca
caacatgctgttgccaaattgagagtgctcgcatctggattttgggtgtctcctggagat
tctgaagaagttgcttctgccatatcacaggctttaagaaaccgtatagaaagagcactt
agagggttttcatatatacgatttggggatgtgttctccaagtatcagccatttactcag
aatgaagaactattcaggaggggtcaacctgtcgctgagttcatctttgctgcaacagaa
gaaacaatatttgttcatgttattatatctgctaagcatgtcagagctctttcaaatggc
gacattgaacctttcctcagcagctctagccggcataccaatgaccaaatttcagttgtt
gtttctcctcatggaatgcgtgggaagctcacgggatgttgtcctggtgatcttgtcaag
caagtgtttttgagctccggaaagtttagagatccaaatggaacttcaggtcttcctttc
aaagttgctcgaggatctggactgccaactcaacaaaggggacaaaactgctttgttgaa
gtgacccttggttgtcaagaaaagctggtgcgggatagtgcgaacttgcacagtaactct
tctcagcctcatggcactgagtctccagcttctaaaatatgtaatcagaggtggccttta
gacaagcttccaatttgtgaaaaaaagtttgtctatccaacagaggctgttcttgttcca
gttatgcagacatcttttgcaagatcatctttgaaaagattctggctacaaaattgggct
ggaccgtctttgtcagcttcatcacttgttatgcattgttttgattttggcagtgatgac
aaagttgattcaatggatggatcttctcttgaaccaagtggaactcgttcttaccatggt
tatcgtagtagtagtaatagtaatagtagtagctatggcagcatgagtagttcctccagt
gacagtgatcgcaaggtcctgggaactcgtgatctggaggcagatgcagattctttaatg
tccagacagtctggtttatcttccttgggtcagatgcagaatgatgtccttcaattgggt
tctaaaaggccacgaagtgggacttcagagtcatttggtcaagcaggcatggttttgaat
ccttccatgactgattatggtaccatggaagccaatatatctattaatggggctgcaaat
gaaaatgttggatctcagtggggatgggacgatgatgatagaggcatggggatggatatt
caagcactactatcagagtttggtgattttggtgacttttttgagaatgatgctttgcca
ctcggggagcctccagggactgctgagtctcaagttctcatgtttcctgcgcctgatggt
ggtgagttgtgtagcagccccagcacctcagtgatggatgtgccagatcgaatgcttgta
tcgacaggttttccaacctttgataacttcaaccaactaaatgctcctgattctgtggaa
gattcagtcatcaaaaaccaagaaaccacaaagagttctgctcccagtcaagttacttgt
atgctgccatcttccaatattgagtttgatcacgtcgtaaaggctgaagcactgatgtca
tttgccccagaatatgggggtgtggaagcccctaacagtgagatctcctctgttattttc
cgaagcccctacattcctagatcttgcaaagtggattctgcatcaagctcaagtcattat
gtatactctgcaacacctccttccccttgctgtaatggatctcatgagaagtccaccttg
ccaagtgagaaagcttgtacagaaaagaaagaactgtgttctgcatttaaatcaaaaaaa
tactacacacatgttgaaagaggaaagcagcaaactggtgcaagtcataatagtcttagc
aaaagtgaagttggaggttcatcagcacagttttttggtttgagccaagcagatgtcaaa
cctatctcagctaaagcaagtgacagctcacaaaaaggagataattgtctcccatccgct
aggactgtccttgcaacagagactgaatgcttagtgtgccaggtttccatgtgtaggctg
cgacatacattgctttcttccagcaacatttcatcttctagtctgagtggattatcttgt
agcagcactcaaaatctaggtcataatgattcaagcaccatggtggacaatatgtcatgc
aaatctgagttgaaaaagaaagaatcaattcctgttaggatagctggtgatgtagatggt
ggaatgctagatggatctttgactgcaccagttggggtctggcgttctgttggaattcct
aaagttgctaagacaggttcatcaaatatggaggtctgcccttccattccacataattca
ttcatggaagaaagtatgctttcatacggactacggcagccactccaggaacttcttgat
ggtatcgcattccttgttcagcaagctacttcatttgttgatgtggctctggatgctgat
tgtggtgatggtccatatgggtggcttgcacttcaagagcagaggaggcgtggattttca
tgtggaccctctatggtacatgctggctgtgggggtcttttggcttcttcccattccctg
gacattgctggaatggagcttgttgatccactctcagttgatgtccaggcatctttaaca
attggtttgcttcagtctgacataaaagaagcgttgaaatctgcttttagcaatgcagat
ggccctctttctgttatggattggtgtaggggccgtaacccatccaatgaatcggcgatg
acttatgatggacactctgcggagtctattgctagtgcaagtgaatgccgagattcttct
agtacagtaactttatctgttggagatcccatgagcccatctctgacctctgctggtgga
gcatctgggctcaaaggtgatggaaccagaggggatgatggaggtacttctctgatggag
tcagatcagcaacactgctcacggatacggcctacactatctgttgttccatttccatca
atacttgttgggtaccaagatgattggctcaaaacctcagccggttccttgcaactctgg
gaaaaggctcctctggaaccttatgcaactgtgaaacatatgagctactacgtagtatgc
ccaaatattgatccacttacaacagctgctactgatttttttcttcagcttggaactgtt
tatgaaacctgcaagctgggaacacatgcaccccaaagtctgggaaatgagatggatata
gattccaagaaaatatcacctggttttgctcttcttgattgccctcaatcaatgaagata
gataccaacaatgcatctatgttgggatcaatcagtgattatttccttttcctatcaaat
ggctgggacctgactagttatttaaagactctttctaaggttcttaagaccttgaaattt
ggttcgtctgtgccagtgaattccaaggaaggaaatggtggaccatgcactgttgtttat
gtggtctgccccttcccagagcctcttgcagtcctacagactgtggttgaagcttcgatt
gctattggatcagtgattcgatcttctgataaagaaaggagatccatgatgcacaatcaa
gttgcaaaagctttgagttacccagcttctgtagatgaatcattttcaaatgttttaact
cttacaggatttagcatcccaaagattgtattgcagattgtgactgtagatgccatattt
agggttactagccccaagctaaatgagctgatcattctaaaggaaattgctttcactgtt
tacaataaggctcgacgaatttcacggggagcatctggtgagacaatgtcatcattatct
gtgccaggggcttctcattcagtcttgatgcaaatgtctccgtcagttcctggtatgtgg
aaggattgtgttggttctcgaattggaggacctcctcttcagagagagagtgaacttgat
acaagcatgagacagggtgcttgggacaactcttggcagacagtaaggagtggggggatt
ggagcagatcccagcagaactggagatatctttcctctggatgatattcgttgtttgttt
gaaccactttttattcttgcagaacctggatccattgagcgtgggctttcaccctttttt
ggtaattcggcagattcattaaagctgtcagatgattgcacaagtactagctttgtgcaa
aattctacttctgcagtaactggggataatggtcctgtttctcagcatgattccttggat
tcagatggtttgacatctggccaccaaaaatcaatcccaagtctgcattgttgttatggg
tggactgaggattggcgctggatggtgtgcatatggacagattcaaggggagaattgctt
gacagttgtgtttaccccttcggaggaatcagtagtcggcaagacacaaagggtctgcag
tccctttttgtccaaatactacaacaaggatgccagattcttcaagcttgttctcctgat
gctggtgtagctaagcctagagatctcgtgattacacgtattggatgcttttttgagctc
gagtgccaggagtggcagaaagctttatattcagctgggggttctgaggtgaaaaagtgg
tctctgcagctccgtcgttcccttcctgatggaatgccagctggcagcaacggaaattct
ttacaacagcaggagatgagtttaatgcaagagcgggcactgccttcttcaccaagtaca
ttgtacagtcctcattctaaatcttcctcattcatgaaaggtggcatcgcacaaccttcc
tcgaggaagcagctaatgggtgggcatgcagtgttagacaattcaaaaggcttattgcaa
tgggtacagagcatcagttttgtctcagtctcgattgatcattcattacaacttgtgtta
caagcagattcatctcctgggtcaagtcaaggtagtgctacttcaggtctgtcaggctat
cttgaaggatacacacctgtgaagtcccttgggtctacatcagcttcctaccttttagtc
ccttcaccgagcatgcgatttctgcctccttctgttcttcagctccctacatgtctcact
gcagattccccgcctctcgcccatcttctacatagcaaaggatctgcaattcccctgtcc
acgggttttgtcgtttcaaaagcagtaccttcaatgaggagagatgccaggagtttatca
aaagaagaatggccttcagttctctctgttagtttaattgattattgtggaggtaacgtt
gtcagccaagagaagtcagggaagggtgccaataagcctgtggggcgaggtgtgagctct
gaatccaaagatatcgaggtggaaacgcacatcatactagatacaatagcagcagaactc
catgctttgtcctggatgactgctagcccagcatacttggagagaagatctgctttgcct
ttccattgtgacatggttctgagactcagaaggcttctccatttcgcagataaggaacgc
tcccggcttccagagaaggctccgacatga
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integrated database retrieval system
