KEGG   Salvia hispanica (chia): 125187546
Entry
125187546         CDS       T09851                                 
Name
(RefSeq) uncharacterized protein LOC125187546
  KO
K03873  elongin-B
Organism
shis  Salvia hispanica (chia)
Pathway
shis04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    125187546
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:shis04121]
    125187546
   03400 DNA repair and recombination proteins [BR:shis03400]
    125187546
Ubiquitin system [BR:shis04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     125187546
   Cul5 complex
     125187546
DNA repair and recombination proteins [BR:shis03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     125187546
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 UBL_UBAC1 GABP-alpha Chal_sti_synt_N TECR_N Dsc3_N
Other DBs
NCBI-GeneID: 125187546
NCBI-ProteinID: XP_047940114
LinkDB
Position
5:complement(5852284..5855372)
AA seq 117 aa
MSQTSRPKSPDDQTGMYIRVKRNKTTYFLQCVPSETILQIKEKLHEITDQPVENQRLILL
PNREMLEDSKSLADQKVENDAVVALTLRKDDNEFEEVNIVRPNDFYQSREADGGSNW
NT seq 354 nt   +upstreamnt  +downstreamnt
atgtcgcagacatcgcgccccaagagccccgatgatcaaactgggatgtatattcgtgtc
aaacgcaacaaaacaacttactttctgcaatgtgtgccgagtgagacaattctgcagatt
aaggagaagttgcatgagatcactgatcagcccgttgagaaccagcgtttgatactactg
ccaaatcgggaaatgttggaagactcgaaatcgctggctgatcagaaggttgagaacgat
gctgtcgttgccctgacactgagaaaagatgataatgagtttgaagaggtaaacattgtg
agaccaaatgatttttaccaatcgcgggaggcagatggtggatctaactggtga

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