Salvia hispanica (chia): 125187582
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Entry
125187582 CDS
T09851
Name
(RefSeq) deoxycytidylate deaminase isoform X1
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00240
Pyrimidine metabolism
shis01100
Metabolic pathways
shis01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
125187582
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
shis02044
]
125187582
Enzymes [BR:
shis01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
125187582
Secretion system [BR:
shis02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
125187582
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
SNAD4
Motif
Other DBs
NCBI-GeneID:
125187582
NCBI-ProteinID:
XP_047940164
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Position
5:complement(8568818..8572225)
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AA seq
236 aa
AA seq
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MCLSEIRGDELERYSSVFRRSSVRCGVLRRRLHPLLQLQRAQKQLLPPKRCRKEETLSAE
PLRPSKTKRYLRCRYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSEKGIILGIGYNGFP
RGCSDDKLPWSKKSKSGDPLETKYPYVCHAEVNAILNRNHASAAGQRLYVTMFPCNECAK
IIIQSGVSEVIYYVEKHLDNPDVAYVASHKLLSMADIKVRRHQPQMDQILINFYEL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttgagtgagatacgaggtgatgaactcgagagatatagctctgttttccgccgc
agcagtgttaggtgcggtgtcctccgccgtcgccttcacccacttcttcaactccagaga
gcccaaaaacagctgctccccccaaaacggtgtcgtaaagaagaaaccctctcggcagaa
ccccttcgacccagcaaaacgaaacggtatttgcgttgcaggtatctgtcttgggatgac
tattttatggccattgcatttctatcagctgagaggtccaaggatccaaatcgacaggtc
ggtgcttgtttggtgagcgagaagggaatcatactaggtattggctacaatgggtttcca
cgtggttgctcagatgacaagctaccatggtctaagaaatccaagagtggggatcccctg
gagacgaagtacccttatgtatgccatgctgaagtcaatgctatcttaaacagaaatcat
gcatctgctgcagggcaaaggctttacgtgaccatgtttccttgcaacgaatgtgcaaag
attattattcagtcaggtgtttcagaagttatctactatgtggaaaagcatctggataac
ccggatgttgcttatgttgcttctcacaagcttctatctatggcagacataaaagtgagg
agacatcagcctcagatggatcagatcttgatcaatttctatgaattatag
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