Salvia hispanica (chia): 125187601
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Entry
125187601 CDS
T09851
Name
(RefSeq) nuclear pore complex protein NUP107
KO
K14301
nuclear pore complex protein Nup107
Organism
shis
Salvia hispanica (chia)
Pathway
shis03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125187601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125187601
03036 Chromosome and associated proteins [BR:
shis03036
]
125187601
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125187601
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125187601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
125187601
NCBI-ProteinID:
XP_047940183
LinkDB
All DBs
Position
5:28599346..28610572
Genome browser
AA seq
1071 aa
AA seq
DB search
MEVDMDVSPSYYDPENLSSRERFRRYGKRHPGSSLSPHHDNSASRFSNAALFLENIKHEV
EMHETDFGGTPFESAAKRRSYHDSYGVSTVDGDIDMIRRRGSESLKVCKKEEDEHIESAD
TTFSLFASLLDSSLQGLMPIPDLILRFESSCRSVSESIRYGANERYRIIEDKLMRKKARF
LLDEAASWSLLWYLYGKGNEELRNDLLLFPTTSHLEACQFVIEDYTAQLCLRIVQWLEGL
ASKALDLDNKVRGSHVGTYLPSSGVWHHTQRHLKRGVSNQKIIHHLDFDAPTREHAQQLL
DDKKQDEALLEDVWTLLRAGRLEEACNLCRSAGQPWRAASLSPFGDSNLLPSLEVLEKNG
KNRMLQAIELESGIGHQWYLWKWASYCASEKIAEQDGGKYESAVYASKCSNLKRLLPVCT
EWESACWAMAKSWLDVQVDIRIAGLRRGEDGQFNNFEEAIGRSPGQGNRVSQPSGPNSWP
LHVLNQQPTNLSSLLQKLHSSDTVHEAVTRACKDQQRQIEMNLMVGDIPHLLDLIYSWVS
PSEDDGNMFRPHGDPQMMRFGAHLVLVLRYLHADQMKDTFKEKITTVGDLIIHMYAMFLF
TTQHEELVGIYASQLARHRCVDLYVHMMELRLNSSVHVRYKIFISAIEYLPFSPDDDLKG
SFEEIIERILSRSRQISTGKHDKSSDIAEQHRLQSQQKAMVVQWLCFTPPSTINDARAVT
AKLFLRALMHSNLLFREFALISMWRVPAVPIGAHTVLSLLAEPLKQQTELLHSTEDRDVS
ESFREFQDWSEYFSCDAKYRKWLKVKLENAEVSPGKLSPEEKQREVTAARESLESSFSLL
LRNNDPWLIPTQDHLHESVESVYLELHATAVLLLPSGECMTPDATLCTTLTSALYSSVSE
EEVLHRELMANVAISPGENSCIEVVLRCLATEGDGLGLHDLNDGGILATVIAAGFKGELA
RFQAGVTLEISRLDAWYSNASGSLDGPATYIVRGLCRKCCIPEIVLRCMEVSVSLMESGY
RPERHHELIELVTSPETDFLHLFSKGQLQELLLSEREYSINEMDLEELPGS
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgacatggatgtttctcccagctattacgatccagagaatctcagcagtaga
gagcggttccgtcgatacgggaaaagacatcctggctctagcctatctcctcatcatgat
aattcggcttcaagattcagtaatgctgctttatttcttgaaaacattaaacatgaggtt
gagatgcatgagacggatttcggaggaacaccttttgaatctgctgctaaaaggagatct
taccatgatagttatggagtttccacagttgatggtgacattgatatgatacgcaggagg
ggaagtgaatctcttaaggtctgcaagaaggaagaagatgagcacattgaaagtgcagat
acgactttctctttgtttgcatctctattggattctagtcttcaagggttgatgcctatc
cccgatctgatactacgttttgagagttcatgccgcagtgtttcagagtcaattagatat
ggtgccaacgagaggtatagaataatcgaggataagttaatgaggaagaaagctcgattc
ttgcttgatgaagctgcttcgtggtctcttctatggtatttatacgggaagggaaatgaa
gaactcagaaatgatctactcctgttcccaacaacttcccatttggaggcgtgtcaattt
gtcatagaagattatacagcacaattatgcctcaggattgttcagtggctggaaggttta
gcttctaaagcgcttgatttggataataaggtcagggggtctcatgttggcacttacctt
ccaagctctggagtttggcatcatacacaaagacatcttaaaagaggtgtctcaaatcaa
aagataattcatcacttggattttgatgcaccaacacgagaacatgctcagcagctgctt
gatgataaaaaacaagatgaagcccttttagaagatgtctggactcttctgagagctggg
agactagaagaggcttgcaatctttgccggtctgcgggacagccatggagggctgcaagt
ttatctccttttggggattccaatttattaccgtcacttgaagtcttagagaaaaatggc
aagaacagaatgttgcaggccattgaactagaaagtggaattggtcatcagtggtatctt
tggaaatgggcttcctattgtgcatctgaaaaaattgctgagcaagatggtggcaaatat
gaaagtgcagtatatgcatccaaatgcagcaatttgaagcgccttctaccagtttgcact
gaatgggagtctgcatgctgggcaatggctaaatcatggcttgatgtccaagttgatatt
cgcatagctggcttgcggcgaggtgaagatggccaattcaataattttgaagaagcaatt
gggcgaagtccagggcaaggaaatcgtgtatctcagcccagtggaccaaatagttggcca
cttcatgtgctgaatcagcaaccaacgaatctttcatcactgctgcagaagcttcattct
agtgatactgtgcatgaagctgttactcgagcatgcaaggatcagcaaaggcaaattgag
atgaatcttatggtaggggacataccccatttgctggacctcatatactcttgggtatca
ccttcagaggatgacggaaatatgttcaggcctcatggtgatccacagatgatgcgcttt
ggtgcacacttagtcttggtgcttcgctacttgcacgcagatcaaatgaaagatactttc
aaagagaagataacgacagttggtgatttaattattcacatgtatgcaatgttcctgttt
actacgcagcatgaggagttagttggaatatatgcatctcagcttgcccgccatcgctgt
gtcgatctatatgtccatatgatggagttgaggcttaatagcagtgtgcatgtcagatac
aagatctttatttcagctattgagtatttacctttttctcccgatgatgacttgaaaggc
agttttgaggaaatcattgaaagaattttgtcccggtctcgtcaaattagtactggaaag
catgacaagtcctctgatattgcagagcaacatcgcttgcaaagccaacagaaagctatg
gttgttcagtggctttgctttacacctccttccacaattaatgatgccagagctgttact
gcaaagcttttccttcgtgcactaatgcatagcaatttgctgttccgggagttcgctctt
atttctatgtggagggtacctgcagtaccgattggcgctcacacagtgcttagtttactt
gctgagcctttgaaacaacaaacagaacttctccattctaccgaggatcgtgatgtttct
gaaagtttcagagaattccaggattggagtgagtacttctcttgcgatgcaaaatatcgc
aagtggctaaaagttaaactagaaaatgccgaggtttcacctggtaaactatcacccgag
gaaaaacagagggaagttactgcagctagagaatctctcgagtcttcattttctctgcta
ctaagaaacaatgatccttggctcattccaactcaagatcatttgcatgaatcggtggaa
tctgtctacctagaactgcatgccacagctgttttattactaccttctggtgagtgtatg
acacctgatgctacattgtgcacaacattgacaagcgccctttactcatcagttagtgaa
gaggaagttctgcatcgagaattgatggcaaatgtggccatctctcctggagagaactct
tgtattgaagttgttcttcgctgcttggcaacagagggtgatgggcttggactacatgat
ctcaatgatggtgggattctggctactgtcattgctgctggcttcaaaggagagcttgct
cggtttcaagctggtgtaacgttggagatctcccgcttggatgcttggtattcaaatgcc
agtggttctctggatgggccagcaacatatatagttcgtggcctgtgtcgcaagtgttgc
attccagagattgttcttcgatgtatggaggtatctgtttcactgatggagtctggctat
cgaccagagaggcatcacgagttaattgagctcgtcacctctcctgaaactgattttctc
catttatttagcaaggggcagttgcaggaactcctcctgtctgagagagaatattcaata
aatgagatggatcttgaggaattgccaggctcttga
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