Salvia hispanica (chia): 125187625
Help
Entry
125187625 CDS
T09851
Name
(RefSeq) EIN3-binding F-box protein 1-like
KO
K14515
EIN3-binding F-box protein
Organism
shis
Salvia hispanica (chia)
Pathway
shis04016
MAPK signaling pathway - plant
shis04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
125187625
04075 Plant hormone signal transduction
125187625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125187625
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125187625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
F-box
LRR_RPS2
LRR_At1g61320_AtMIF1
LRR_14
Motif
Other DBs
NCBI-GeneID:
125187625
NCBI-ProteinID:
XP_047940202
LinkDB
All DBs
Position
5:complement(13407807..13411238)
Genome browser
AA seq
633 aa
AA seq
DB search
MPALVNYRGDDDLYSGASLRSGDSGLLLSNSHVEIYCPPRKRSRISGPCVISGNFFEDNR
PSVDVLPDECLFEIFRRLPGGRERSSAACVSKRWLTILSSVRSSEFYNKEHVSADEDMEV
ECDGYLTRCVEGKKATDVRLAAIAVGTSSRGGLGKLSIRGSNSLRKVSNFGMSAIARGCP
SLKALSLWNVPSIGDEGLFEIARECHSLEKLDLCQCPSISNKGLAAVAKSCPNLTAVNIE
SCSNIGNDGLQALAKFCPKLQSITIKDCARVGDQGIACLLSSASALTKVKLQSLNITDYS
VAVIGHYGKAIANLVLCGLQNVSQKGFWVMGNARGLESLSNLTVSSCRGITDLSIEAIGK
GCPNLKHMCVRKCCFVSDNGLVAFAKATSSLEYLQLEECNRITQIGILTALSCISSKLKS
VSLVKCMGIKDLSMDFPTLSPCESLRSLSIRSCPGFGSTSLAMVGKLCPHLHHLDLSGLC
GITDTGLLPLLECCEAGLAKVDLSECSNLTDEVILALARLHGATLELVNLDGCQKITDAT
LAALAESCPLLNDLDVSRCLVTDAGVAALSRGVQSNLQVLSLSGCSMVSNKSIPALERLG
QTLVGLNLQHCNSISNSKVEMLTEKLWRCDILS
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctcttgtcaattacagaggtgatgatgatctgtattctggggcttcattgcgt
tccggagattccggcctcttactctccaactcccacgtggagatctactgccctccaagg
aagcggtcgcggatcagcggcccttgcgtcattagtgggaacttcttcgaggataacaga
ccatctgttgatgtcctcccagatgagtgcttattcgagatcttcaggcgcttacctggt
ggccgggagaggagttccgcagcatgtgtttcaaagcgctggctcacgatcttgagcagc
gttcgcagctctgagttctacaacaaggaacatgtctccgcggatgaggatatggaagtg
gaatgcgatgggtacctcactaggtgtgtggaagggaagaaagcgacggatgtcaggctt
gccgccattgcagttggcacatctagccgcgggggacttgggaagctttctatcagggga
agcaactcgttgaggaaggtttctaactttggtatgtcagcgatagctcgcggttgccct
tccctcaaggctctctcattgtggaatgtgccctccatcggtgacgaaggactatttgag
attgcacgagagtgccattcgttggagaagctagacctgtgccaatgcccttcaatctct
aacaagggtttggctgccgtcgcaaagagttgtcccaatttgactgcagtgaatatcgag
tcgtgttcaaacattggcaatgacggccttcaagcacttgccaaattctgtccgaagctg
cagtcaatcactatcaaagactgcgcgcgtgttggggatcagggaattgcctgccttttg
tcatcggcctctgccttgacaaaggtgaaacttcagtcgctcaacatcacagattactcg
gttgctgtgataggccactacggaaaagccattgcgaatcttgttctatgtgggcttcaa
aatgtgagccaaaaaggcttctgggtgatgggcaatgcacgaggtcttgaatcgctatcg
aatctgaccgttagttcttgccggggaataaccgacttgagcatcgaagcaatcgggaag
ggctgcccaaacttaaaacacatgtgtgtccgtaagtgttgctttgtgtctgataatggg
ctcgtggcttttgccaaggcaacgagttctcttgaatacttgcagttggaggaatgcaat
aggattacacaaatagggatcttgactgctctttcctgcatcagttcaaaattgaaatct
gtttctttggttaaatgcatgggaatcaaggatctatcgatggactttccaacgctctcc
ccctgcgagtctcttcgttctttgtcgatccggagctgtcccggattcggaagtactagt
ttggctatggttgggaagctatgcccccacctacatcacctggatctgagtggactttgc
gggatcacggacacagggcttctcccgctcctagaatgctgtgaggcggggctcgccaag
gttgatcttagcgagtgctcgaatttgaccgacgaagtgatcttggctttggctaggttg
cacggtgcgactcttgaattggtgaatctcgacgggtgccaaaagatcaccgatgcaact
ctagcagcgctggccgagagttgcccgttactcaatgaccttgacgtctccaggtgtttg
gtcacggatgctggtgttgctgctctttcgcgtggagtgcaatctaatctgcaggtcctc
tccttgtcggggtgctcgatggtgtcgaacaagagcattcccgctctcgagagactgggg
cagacactcgtcggcttgaatctccagcactgcaactccatcagcaacagcaaagtggag
atgctcactgagaaattgtggagatgtgatatcctttcttga
DBGET
integrated database retrieval system
