Salvia hispanica (chia): 125187771
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Entry
125187771 CDS
T09851
Name
(RefSeq) ABC transporter F family member 1-like
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shis03009
]
125187771
Ribosome biogenesis [BR:
shis03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
125187771
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_23
AAA_22
AAA_28
RsgA_GTPase
MMR_HSR1
AAA_15
AAA_16
AAA_27
DUF5906
VapE-like_dom
AAA_30
MukB
SRPRB
Motif
Other DBs
NCBI-GeneID:
125187771
NCBI-ProteinID:
XP_047940360
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All DBs
Position
5:23197922..23201572
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AA seq
598 aa
AA seq
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MVSDASKKKAAQKKAAAAAKRGGKATASKAAAAAPENGSSNVDSLASGVGDLVISDRTCT
GVLCSHPLSRDIRIESLSLTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLASIGAR
ELPIPEHMDIYHLSREIEASDMSSLQAVISCDEERLKLEKEVEILSTQDDGGGEALERIY
ERLDALDAATAEKRAAEILFGLGFTKQMQEKKTRDFSGGWRMRIALARALFMNPTILLLD
EPTNHLDLEACVWLEEMLKKFERILVVVSHSQDFLNGVCTNIIHMQSKKIKLYSGNYDQY
VQTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTE
KVARDKVLVFNFTDVGKLPPPVLQFVEVKFGYTPDNLIYKNLDFGVDLDSRVALVGPNGA
GKSTLLKLMTGDLVPQDGMVRRHNHLRIAQFHQHLAEKLDVEMSALQYMMMEYPGHEEEK
MRAIVGRFGLTGKAQVMPMKNLSDGQRSRVIFAWLAWRQPHMLLLDEPTNHLDIETIDSL
AEALNNWDGGLVLVSHDFRLINQVAKEIWVCENQAVTRWEGDIMDFKRHLRARAGLFD
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgatgcgagtaagaaaaaggcggctcagaagaaggccgcggccgccgctaaa
agagggggtaaggccacagcatctaaggcggctgcggctgcgcctgagaacggtagcagc
aatgttgatagtctggccagcggagttggggatcttgtcatttctgatcggacgtgtacc
ggtgttctctgctcccatcctttgtcccgagatattcggatagaatctctttccctgact
ttccatggccatgatctcatagttgactctgaactagaactgaactatggcagacgttat
ggtttgcttggcttgaatggctgtggaaagtctactcttcttgcttccataggtgcccgt
gagcttccgattccagagcacatggatatttatcacctttccagagaaatcgaagcttct
gatatgtcctcgcttcaggctgttataagttgtgatgaggagcgattgaaattggagaaa
gaagttgaaattttgtctacccaggatgatggtggtggagaagcccttgaacgcatttat
gaacggttggatgcattggatgcagccactgctgaaaaacgagctgctgagattttattt
ggtcttggttttacaaagcaaatgcaagagaaaaagacacgcgacttttctggtggctgg
aggatgaggatcgctttagcaagagctctcttcatgaatcccactatattgttgcttgat
gaaccaactaatcatcttgatttggaggcatgcgtctggttagaagagatgttgaagaag
tttgagcgaattcttgttgtggtttcacattcccaggatttcttgaatggagtttgcacg
aacatcatacatatgcagagtaagaagataaagctctactctggaaattatgaccagtat
gtccaaaccagatctgaacttgaggagaaccagatgaaacaatataagtgggaacaggag
cagatagcgtcaatgaaggaatacattgcacggtttggtcatggatctgctaagcttgcc
cgtcaagcccagagtaaggagaaaactttggcgaagatggaacggggtggtcttacggag
aaggtggcccgagataaagtccttgttttcaatttcactgatgttggaaagctcccacct
cctgttcttcagtttgtggaagtgaagtttggttacacacctgataatctcatctacaag
aatcttgattttggtgtagacctcgattcgagagtggcattggttggacctaatggtgct
ggtaagagcacactgctaaagctgatgacaggggatctggttcctcaggatggcatggtt
cgccgccataaccacttgaggattgcacagttccatcagcatttggctgagaaacttgat
gtggaaatgtcagctctccaatatatgatgatggagtatcctggacatgaagaagagaag
atgagagccatagttggaaggtttgggctaactggcaaagcacaagtgatgcctatgaag
aacttgtctgatgggcagaggagccgcgtgatctttgcatggctagcttggaggcagcca
cacatgctactgctggatgagccaaccaaccatctggatattgagacaatcgactcactg
gccgaggcacttaataactgggatggtggcttggttcttgttagccacgatttcagactg
ataaaccaggttgcgaaagagatatgggtgtgcgagaatcaggcagtgactcggtgggag
ggagacatcatggacttcaagcggcacttgagggcgagagctggtttgttcgactaa
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