Salvia hispanica (chia): 125187977
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Entry
125187977 CDS
T09851
Name
(RefSeq) 25.3 kDa vesicle transport protein
KO
K08517
vesicle transport protein SEC22
Organism
shis
Salvia hispanica (chia)
Pathway
shis04130
SNARE interactions in vesicular transport
shis04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
125187977
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125187977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125187977
Membrane trafficking [BR:
shis04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
125187977
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
HMUDK_HMUD1
Orbi_VP5
Motif
Other DBs
NCBI-GeneID:
125187977
NCBI-ProteinID:
XP_047940638
LinkDB
All DBs
Position
5:complement(15026607..15027851)
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AA seq
226 aa
AA seq
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MLKMTIVGRVSDGLPLALGHGSRYVNEENNDGDISSHKQQAEFLLQEVSRRALPHSKMTI
FLDDHCFNYIVENGMCFMALCDSMYPTKLAFCYLQDLHKEFVKFEDVGLNATSIRPYSLV
KFGGVIANVRRKYVDTRSQANLSKMNSGASQDADVISESFSRIVQRRRRSELFGRISEAH
LHSSPIWCSNRLEIIALKWIPIGLVVAVATVVIWTRWFHCDVFLIC
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagatgacaatagttggaagggtaagtgatgggctgcctctagctctaggccat
ggttcaagatatgtgaatgaagagaataacgatggtgacatctcttctcataagcaacaa
gccgagttcttgctccaggaagtttctagaagagcacttccacattccaagatgaccatt
ttcttggatgatcattgcttcaattacattgttgagaatggaatgtgcttcatggcactc
tgtgattcaatgtatccaacaaagctggccttttgttatttacaagatttgcataaggag
tttgtcaagtttgaggatgtgggcttgaatgccacttctatcagaccctacagccttgtt
aaatttggtggtgtaattgcaaatgtaagaaggaaatatgttgacacaaggtcacaggcc
aacttgtcaaagatgaactctggtgcttctcaagatgcagatgtgatttcagagagcttt
tcgcgtattgtacagcgtaggcgaagatcggaactgtttgggaggataagtgaagcacat
ttgcattcttctccaatttggtgttccaataggcttgagataatcgcgttgaaatggatc
ccaataggactggttgtagctgttgcaactgtagttatatggaccagatggtttcattgt
gatgtgttcttgatttgttga
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