Salvia hispanica (chia): 125188042
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Entry
125188042 CDS
T09851
Name
(RefSeq) far upstream element-binding protein 2-like isoform X1
KO
K13210
far upstream element-binding protein
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125188042
03041 Spliceosome [BR:
shis03041
]
125188042
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
125188042
Spliceosome [BR:
shis03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125188042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
125188042
NCBI-ProteinID:
XP_047940735
LinkDB
All DBs
Position
5:complement(40978930..40983488)
Genome browser
AA seq
668 aa
AA seq
DB search
MADDLLYPAAAADSNKRKYEDSLSPVARRSTGFSSAPDAAAPPQLSEIELATLKAQEIAA
RFLNNADPTKRARVENVGNGGRGFDSSDYSSQKPSGYGLSGPPQGSSSGYPGPSKRIDIP
NGRVGVIIGKGGETIKYLQQQSGAKIQVTRDMDADPNSPTRGVDLMGTPDQIARAEQLIQ
DVLSEAEAGGAGSTSRRVGGQSFGAEQFVMKIPNNKVGLVIGKGGETIKSMQTRTGARIQ
VIPLHLPPGDTSQERTVQIDGTSEQIEAAKLLVDEVISEERMGFCGSSPIIRPTITNRNR
NSSMSGGYAQQGYQARPPSNWGQPGAPMQQPGYGYPQAGAYPGQPPQYSMNQPPYSGYPQ
QSTSSGYPTSWDPSTASQTQQAPQGAGYDYYNQQQPPQQQPAQGGPAAPTDASGYGYGAY
GQAQAYSQGHYGQYGYGSYPTGAAAAGYGQPQQNPAAGYENQQQGYNSKSSNTSNPTPGA
SYGAQDEANQAPASGQSYNAGGQPAANPNYPPQASNQPGYGGGYGSQTTPPSYAPPQAQK
PPGSQATYAQPQQSPSSQGAGYAQSGYSQSQPAAAHAGYAQTAAYPTSQAGYGAPPYAAA
AATQPGYGQQQAAAYNSAYGGAAGYSQPPAYPSADGSAGGDARGAYDSTTPPPQSAPPTG
SAKASPPA
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgatttgctctacccggccgccgctgccgattccaacaagcgcaagtacgag
gattcactgtcgccggttgcgcgcaggtcgaccggattctcgtcggcgccggacgcggcg
gcgcctccccagctgagcgaaatcgagctggcgacgctgaaggcgcaggagatcgccgcg
agattcctgaacaacgctgatccgacgaagagagccagagttgagaatgtggggaacggt
ggcagaggattcgattccagcgattatagtagtcagaagccttcaggttatggtcttagt
ggtccaccacaaggctcctcctcaggttatcctggtccaagcaagaggattgatattcca
aatgggagggtgggtgtgataatcggcaaaggaggggagactatcaaatacctccagcaa
cagtcgggagctaagattcaggtcactagggacatggatgcagaccctaattcccctaca
agaggggttgatctcatgggtactcctgatcagatagccagagcagagcagcttatccaa
gatgtactttccgaggctgaggctggtggagctggatcaacttctcggcgtgtgggtggt
caatcatttggagctgagcagtttgtgatgaagatccccaacaacaaggtgggacttgtt
atcggtaaaggaggtgaaaccattaaaagcatgcaaacaaggaccggggctcgcattcag
gtcatacctctgcatttaccacctggtgatacgtcacaggagaggactgtccaaattgat
ggaactagtgagcagatcgaggctgctaaactattagtagatgaagtcatcagtgaggag
aggatgggcttctgcgggagtagtccaataatacgaccaaccataacgaatcgtaataga
aattcatcaatgtctggaggatatgctcaacaaggataccaagctcgacctccttctaac
tgggggcagcccggcgcgccaatgcaacaacctggttatggctaccctcaagctggtgca
taccctggtcaaccaccacaatacagcatgaatcagcctccctattccggttatcctcaa
caatccacctctagcggatacccaaccagctgggacccgtcgactgcttcccaaactcag
caagccccccagggtgccgggtatgattactataaccagcagcaacctccacagcaacag
cctgcccaagggggtcccgctgctcccactgatgcttcaggatatggctacggggcctat
ggccaggctcaagcctacagtcaaggacactacggccagtatggctatggtagttatcca
acaggtgcagctgcagctggttacggccagcctcagcagaatcccgctgcaggatacgag
aaccagcagcaaggatataactctaaaagtagcaatacctctaacccgacacctggtgca
tcttatggagcacaggatgaagccaatcaagcgcctgcatctgggcagtcatacaatgcc
ggaggtcaacctgctgctaatcccaactatccacctcaagcttccaaccagccaggttat
ggaggtggttacggatcccagacaacccccccgagctatgcacctccccaggcgcaaaaa
ccaccgggtagccaggcaacctatgcgcaaccacaacagtcacctagctctcaaggcgct
ggctatgcacagtctgggtattctcagtcgcagcctgctgcagcacatgctggctatgct
cagacggcggcttatcctacatcccaggcagggtatggggctccaccctacgcagcagca
gcggctacccaacctggctatgggcaacagcaggctgcagcctacaacagcgcttacggt
ggcgctgctggatattcccagcctccagcttacccttctgctgatggctcagccggtggt
gatgcacgtggagcgtatgattctactactcccccacctcaatctgccccgcccaccggg
tctgccaaagcatcaccgccagcttga
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