Salvia hispanica (chia): 125188047
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Entry
125188047 CDS
T09851
Name
(RefSeq) ribonuclease TUDOR 2-like
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
shis
Salvia hispanica (chia)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
Motif
Other DBs
NCBI-GeneID:
125188047
NCBI-ProteinID:
XP_047940741
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All DBs
Position
5:complement(7762075..7768589)
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AA seq
982 aa
AA seq
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MASAAGATGWLRGTVKAVSSGDCLVIMGNTKAEIPPEKTITLSSLMAPKLAPRRGGLDEP
FAWQSREFLRKLCIGKEVTFRVDYTVPSINREFGSVFLGDKNVALLVVAGGWAKVRDQGQ
QKGEASPYLADLLRLEEQAKQQGLGRWNTTPGAAEAAIRDLPPSAVSDPGNFDAMALLAA
KKGSPLEAIVDQCRDGSTLRVYLLPDFQYVQVFVAGIQAPSAGRRAAAESAIATEVVPTE
QNGDSTTEGRAPLTSAQRLAASSASANEVPADPFGKEAKHFTEIRVLHRDVRIVLEGVDK
FSNLTGSVYYPDGESAKDLSLELIEHGLAKYVDWSASLLEDEARRRLKNAELQAKKSRLR
IWTNYVPPATNSKAIHDQNFTGKVIEVASADCIVVADDSLPFGDPAAERRVNLSSIRGPK
MGNPRRDQKPDPYARDAKEFLRTRLIGRQVNVSMEYSRKVGLTDGGAAPAGSGDTRVMDF
GTVFLANPSKDGDDATAANQTNGVNIAELLVARGFATTVRHRDFEERSNYYDALLSAESR
AISGKKGMHSAKDPPTRHMTDLLTANAKKAKDFLPFLQRNRRMSAVVEYVLSGHRYKIDI
PKATCSIALSLSGVRCPGRGEPYSEEAIAFMRRKIMQRDVEIEVETVDRTGTFLGTMWES
RTNVAIPLLEAGLAKLQTSFGLDRIPEAHLLVQAEQSAKQKKLKIWENYVEGEEVTNGTS
VERRQKEEFKVTVTEVLEGGQFYIQSVADQKVAAIQKQLSSLSLQEAPLIGAFNPKKGDI
VLAQFSADKSWNRAMIVNAPRGAVESANDKFEVFYIDYGNQEIVPYSQLRPLDASVSAAP
GLAQLCSLAFVKVPGLSDDYGQEAAIRLSEHLLSTPKEFRAIIEDKDTSGGKVKGQGTGT
VFLVSLIDSEAETSINAVMLQEGLGRLEKRRRWEPKDKQQAMDELEKFQTEAREKRLGMW
EYGDIASDDDEAPPLRKAAGKR
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggcagctggagccacaggatggttgaggggaacagtaaaagctgtttcatct
ggtgactgcttggtgataatggggaacacgaaggctgagattcccccagagaagacaatc
actttgtcttcattaatggctcctaagttggctccccgaagaggtggacttgatgagcca
tttgcatggcagagtagagaattcttgaggaagctttgcattggaaaggaggtaactttc
agagtggattacactgtaccatccattaatcgggagtttggctctgttttccttggggat
aagaatgtggctttgctcgtggttgctggaggctgggcaaaggttagggatcaaggtcaa
cagaaaggagaagctagtccttacttggcagatctgctgcgccttgaagagcaggccaag
cagcaaggtcttggtcgttggaacacgaccccaggtgctgctgaggcagccattagggac
ctgcctccttcagcagttagcgaccctggtaattttgatgctatggctctattggctgct
aagaagggcagtcctttggaggctattgtcgaccaatgtcgtgatggaagcacactccgt
gtttatttgcttccagactttcaatatgtccaagtgtttgttgctgggattcaggctccg
tctgctggcagaagagctgcagcagaatctgccattgctactgaggtagtgcctactgaa
caaaatggagattcaacaactgaaggtcgtgctcctttaacatctgcacagaggcttgct
gcatcatctgcatcagcaaatgaagttcctgcagatccctttgggaaagaagccaagcat
ttcacagaaatccgtgtgttgcacagagatgtaaggattgtattggagggtgttgacaaa
tttagcaatcttaccggttcagtatactatcctgatggcgaatcagcaaaggatttgtct
ttggagcttattgaacatggtttagcaaaatatgtcgactggagtgcaagcttgctggaa
gatgaggccagacggaggttgaagaatgcagaacttcaagcaaagaagtcaaggttaaga
atctggacaaattatgtccccccagcaaccaactccaaagccattcatgaccagaacttt
acaggaaaagtgattgaagttgcaagtgcagactgtattgttgttgctgatgattccttg
ccatttggagatcctgctgcagagcgacgagtcaatctctcaagtatacggggccctaaa
atgggaaatcctcgtagagatcaaaaacccgatccatatgctcgtgatgctaaggaattc
ctgaggacacgcctaattggtcgtcaggtgaatgtttctatggaatattccaggaaggtt
ggtctgacagatgggggtgctgctccggctgggtctggagatacaagggtaatggatttt
ggaactgtctttcttgctaatccgtctaaggatggggatgatgctactgctgctaaccaa
acaaatggggttaatattgccgagcttttagttgctcgtggttttgccactactgttagg
catcgagattttgaggagaggtcaaattattatgatgccctcttatctgctgaatcacgt
gctatttctgggaagaaaggaatgcattctgctaaagatcctcccaccaggcatatgaca
gatttgctaacggctaatgcaaagaaagcgaaagacttcctaccatttttgcaacgcaat
agaaggatgtctgctgttgtcgaatatgttctcagtggacaccgatacaaaatagatatc
cctaaggcaacatgcagtattgcattgtcgttgtctggtgtcagatgccctggccgtggt
gagccctattcggaagaagccattgcatttatgaggcggaaaataatgcagagggatgtt
gagattgaagtcgaaactgttgatagaactggaacctttttgggaaccatgtgggagtct
agaaccaatgtggcaataccacttttagaggcgggtttggctaaacttcaaacttccttc
ggcctcgataggatcccagaagctcatctcctggttcaagcagagcaatcagcaaagcag
aagaagttgaagatatgggagaattatgttgagggagaggaagttaccaatggtacatct
gttgaaagaagacaaaaagaggagtttaaggttacggtcacagaagtcctggaaggtggt
caattttatattcagtcagttgctgatcagaaagtggctgccatacagaaacagctttct
tcattaagccttcaagaagctcctttaattggtgcctttaatcctaaaaagggagatatt
gttctggctcagtttagtgctgacaaatcttggaatcgtgcaatgattgttaatgctcca
cgtggtgctgtggaatctgcaaatgacaagtttgaggtgttttacattgattatgggaac
caagaaatcgtcccctacagccagttgcgtcctcttgatgcttcggtgtctgctgcacca
ggccttgctcagctatgcagccttgcattcgtcaaggttccaggcttgtcagatgactat
ggtcaagaagcagctatccgtttgagcgaacacctattgagcactcctaaagaatttaga
gccatcatagaagataaggacacgtcaggtggaaaagtgaaaggacagggcacgggcact
gtctttttggtaagtctgattgatagcgaggctgagacgagcatcaatgcagttatgctg
caggagggactgggtcggttggagaaaaggcgtagatgggagcctaaggataagcaacag
gcgatggacgaactggaaaaattccagacggaagcccgggagaagagactagggatgtgg
gagtatggagacattgcgtctgatgatgacgaagcacctccactaaggaaagctgctggg
aagcggtga
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