Salvia hispanica (chia): 125188189
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Entry
125188189 CDS
T09851
Name
(RefSeq) protein transport protein Sec24-like At4g32640 isoform X1
KO
K14007
protein transport protein SEC24
Organism
shis
Salvia hispanica (chia)
Pathway
shis04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125188189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125188189
Membrane trafficking [BR:
shis04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
125188189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Transposase_1
Motif
Other DBs
NCBI-GeneID:
125188189
NCBI-ProteinID:
XP_047940905
LinkDB
All DBs
Position
5:7308010..7320134
Genome browser
AA seq
1087 aa
AA seq
DB search
MATPGGPRPGNFPPNFNPNSLANNMQNLQINQPNQQQPNNAGGSAPRPPPNATPFGQQAP
PFAGNRPGPPPPGVFPRAPGPPNVPSQTSLPPNMVSSRPTGPPPGSQPPPFSSRPPPPGA
MPSSIGRPVAPTPPAPGPRPGSYPSSPLTSAPSTPSHASASGPVSNGPPTFAPGMTQSGS
SFPPAMGGMPRPLVGPPQPPAMLSSRPSSQPPQMRPTFGAPPTAVSSASGQPAPPFSGPP
RNMMPPMGSSPFSAPNTGMHQSMNSPYGMQTWPAQPQQVTPPPPIPGSMQQPPRMFGLPP
GGQSLPNQSMALNQTGQSKIDPNQIPRLSQSGSVIVHETRQGNQANPPPPATSDYIVKDT
GNCSPRYMRCTINQVPLTVDLLSTSGMQLSLLVQPLALPHPSEEPIHVVDFGESGPVRCS
RCKGYINPFVKFIDQGRRFICNLCGFTDETPRDYHCNLGPDGRRRDADERPELCRGTVEF
IASKEYMVRDPMPAVFFFLIDVSMNATQTGATAAACSAIKQVIADLPKGPRTMVGIATFD
STIHFYNLKRASQQPLMLIVPDVQDVYTPLESDVIVQFSECSEHLEMLLDTIPTMFESNR
IADSALGAAVKAAFLAMKSTGGKLLVFQSVLPSAGIGSLSAREAEGRSNMSAGEKVLMLH
IFALSGLILSDKTLKTMAIEFAEYQVCVDLFITSQMYVDIASLSVIPTTTGGQVYYYYPF
SARSDPAKLYNDLRWNVTRPQGFEAVMRVRCSQGIQVQEYSGNFCKRIPTDVDLPAIDCD
KTIMVSLKHDDKLQEGSECAFQCALLYTTVYGQRRIRVSTLSLPCTNMLSNLFRSADLDT
QFACITKQAAIEIPSAPLAQVRDQATNVCINILYSYRKFCATVSSAGQLILPEALKMLPL
YTLALLKSTGLRPDGRIDDRSVWINYVSPLPTPLVIPLVYPRMIALHDLNEKELDDSIIP
VPIPLSSEHIATEGIYLLENGVDCLIYLGDNVQPNILQQMFGISSLEDIPNQFILQQYDN
PLSKKLNDIVNEIRRQRCSYLRLRLCKKGDPSGMTFFSYLIEDKTANGLSYVEYLIHIHR
QIQSKMA
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcccggaggacctaggccagggaatttccccccgaattttaaccccaattcc
cttgctaataatatgcaaaacctacaaattaatcagcctaatcagcagcaaccgaacaat
gctggtggtagtgcccctagacctcctccgaatgctacaccattcggtcaacaggctccg
ccttttgctggcaacagaccaggcccacctccccctggtgtatttccaagggctccagga
ccacctaatgttccttctcaaacatcactgcctccaaatatggtttcttctagacctact
ggtccaccgcctggatctcagcctcctcccttttcatcaagaccgccaccacctggggca
atgccatcatccattggtagacctgttgctcccacacctcctgcaccgggtcctcgtcct
ggatcatacccgtcttcccctctgacatcagctccctccactccgtctcatgcaagtgct
tctggtccagttagtaatggaccgcctacatttgcaccaggtatgacacaaagtgggtca
tcattccctcctgctatgggtggtatgccgaggcctttagttggacctccgcaaccacca
gctatgttatcatctaggccttcttctcagccgccgcaaatgcgccctacttttggtgct
ccacctactgctgtatcatctgcctctgggcaacctgcaccgccattttcaggcccgcca
cggaatatgatgcctccgatgggttcatccccattttcagcaccaaatacaggcatgcat
caatctatgaattctccttatgggatgcagacatggccagcacagccacagcaggtgact
ccacctcctcctattcctgggtctatgcagcagcctccgcggatgtttggattgccacca
ggtggacaatcacttccaaatcagtctatggctctgaaccaaacagggcaatctaaaatt
gatcccaaccagattccccgtctttctcagagtggatctgtaattgttcatgagacccgt
caaggcaatcaggcgaaccctccaccgcctgcaacaagtgactatatagttaaagacact
ggaaattgcagtccacgctacatgaggtgtactatcaatcaggttcctttaactgtagac
cttctatctacatcgggaatgcagctgtctctattggtccagccattagctctcccgcat
ccatctgaggagcctatccacgttgtagattttggggaaagtggtcctgttcgatgttct
cgttgcaaaggttacattaatcctttcgtgaagtttattgatcaaggaagacgtttcatt
tgcaacctgtgtggatttacggatgaaactccacgtgactatcactgcaacttaggtcca
gatggtcggcgtagagacgctgatgaaaggcccgaactatgtcgaggaacagttgaattt
attgcgtctaaggagtatatggtgcgtgatccaatgcctgctgtatttttcttcttaatt
gatgtatcaatgaacgctacacaaactggtgcaactgcagcggcttgcagtgccatcaaa
caagtgatagccgatcttccaaagggtcctcgaacaatggtgggtattgctacgtttgat
tccaccatccacttttacaacctaaaacgagcttcgcagcagccattgatgctaattgtt
cctgatgttcaagatgtctatactccactggaaagtgatgttattgttcaattttctgag
tgctctgagcatttagaaatgctgcttgacaccattcctacaatgtttgagagtaataga
attgctgattcagctcttggtgctgctgtgaaggctgctttcttggcaatgaaaagcact
ggtggcaaactcttagttttccagtcagttttgccgtccgctggtatcggatccctttct
gctcgagaggcagaaggcagaagcaacatgtcagcaggagaaaaggtcttaatgctgcat
atatttgcattgtcaggactgatattatctgataagactctaaaaactatggcaatagaa
ttcgccgagtaccaggtctgtgttgacttgtttattacatcgcaaatgtatgtggatatt
gcatctctctctgttattccaacgacaactggaggccaggtatactactattatcctttc
tctgcccgctccgatcctgctaagctgtacaatgatcttcggtggaacgtcacaaggccc
caagggtttgaggcagtgatgcgtgttagatgtagccagggtattcaagttcaagaatat
tctggaaatttctgtaagcgcataccaactgatgttgatctacctgcgattgattgtgac
aaaacaataatggtctccctgaagcatgatgataaactacaggaaggttctgagtgtgct
tttcagtgtgctcttctttacaccactgtatatggacaaagaagaatcagagtttccaca
ctgtccctgccttgcaccaacatgctcagtaatctattccgctctgctgatctagacacc
caatttgcatgtatcacaaaacaagctgctattgagattccttcagctcctcttgcacaa
gtcagggatcaagctaccaatgtttgcatcaacattttatactcgtaccggaagttctgt
gctacggtgtcatcagccggacaacttattctgcccgaggcacttaaaatgttgcctctc
tatacacttgctttactcaaatccactggattacggcctgatggaagaattgatgatagg
tctgtctggattaattatgtctcaccattacctactcctttggtgatcccattggtgtac
cctagaatgatagcacttcatgaccttaatgagaaggagttagatgattccattattcct
gttccgattccactttccagtgagcacattgctaccgaaggaatatatcttcttgagaat
ggagtggattgtttgatatatttgggtgacaatgttcaaccaaatattttgcaacagatg
tttggcatttcttcacttgaagatattcctaatcagttcattttgcagcaatatgacaat
cccttgtcaaagaagctgaatgacattgtaaatgagataaggcgccaacgatgttcttac
ctacgcttgagactgtgcaaaaagggggatccatcagggatgacgttcttctcgtacctg
attgaagacaagacggctaatgggttgtcatacgtcgagtatctaatacacattcatcga
cagattcagagtaaaatggcttga
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