Salvia hispanica (chia): 125188317
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Entry
125188317 CDS
T09851
Name
(RefSeq) DNA topoisomerase 1-like isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shis03032
]
125188317
Enzymes [BR:
shis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
125188317
DNA replication proteins [BR:
shis03032
]
Eukaryotic type
DNA Topoisomerases
125188317
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
PIN_5
Motif
Other DBs
NCBI-GeneID:
125188317
NCBI-ProteinID:
XP_047941051
LinkDB
All DBs
Position
5:36391587..36399120
Genome browser
AA seq
887 aa
AA seq
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MTVEACNKQKLMDDMDDDDGPLVFKRSSSSSSKQNQSNSDTKKSVPHKHDEQPGRPASNV
RPQNGQNNSVQRSKIFPASKTPSPKLSNSLTKELEVKSTMVDSRPSTSMRGELTSVKRQI
KGENSLSGSTRGPKEESEDSEDDKPLSARLHAGRSKINSGNADKGANASNFSQTLKIPKS
EDSDDEMPLSSKFRVKAAAGGSTNRSSTSGEKKPLVAECGQNGSASTDRKSSTVLKKRTV
DSIEPSDTSSLKRPKLSETSTLHKNKESSIKAETKEEDDEDDVPISQRIKKTAVAEKKSA
PIKKLTTPTTPITKKFNKKPNKTIKKLKYSESSRIPPSSGEGQKWTTLVHSGVIFPPPYK
PHGVKILYKGKPVNLTPEQEEVATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQS
LEHCDFTPIYDWHQSEKEKKKQMTTEEKKALKEEKLKQEEKYMWAIVDGVKEKVGNFRVE
PPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQSWKEIRHDNTVTWLAF
WNDPINPKEFKYVFLAASSTLKGQSDKEKYEKARLLKNYIQGIRTAYTKDFTSKDPTKKQ
IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNE
VEVEVAVFRAIQEFRNRKKGGDDIFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDD
MLSRETKGGEVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQMTRLNEKIDELKGVLEEL
RTNLARVKKGKPPLMSSDGKSKRSLNPDSLEKKISQTTAKIEKMERDKDTKEDLKTVALG
TSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPGFRF
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgactgttgaggcatgtaataagcaaaagctaatggatgatatggatgacgatgatgga
ccattagtttttaaaaggagtagctcatcttcttcaaagcaaaaccaatcaaactcggac
acaaaaaaatcagtacctcataaacacgatgaacaaccagggaggccagcatcaaatgta
cggccacaaaatggtcagaataactctgttcaaaggagtaagatattccctgcttctaag
acaccttccccaaaattatctaattctcttaccaaggaattggaagtaaagtctaccatg
gtagattctagaccttccacttcaatgagaggtgagttaacctctgtcaagcgtcagatt
aaaggtgagaattctttgagtggatctactcgtggaccaaaggaggaatcagaagattct
gaagatgataaaccacttagtgctaggcttcatgccggccgatcaaagatcaactccggc
aatgctgataaaggggctaatgcttcaaattttagtcaaacattgaagattcccaaatca
gaagattcagatgatgaaatgcctttgtcttccaagtttcgagttaaggctgctgctggg
ggttcaactaacagatcttctacatctggtgagaaaaaacctctggtggcagaatgtggt
caaaatggttcagcatcaacagataggaaatcttcaactgttttgaagaagagaactgta
gatagtatagaaccttcagacacatcttctttaaaaaggcccaagttatctgagacatct
acacttcataaaaataaagaatcgtccattaaagctgaaacgaaggaagaagatgatgaa
gatgatgttccaatatcacaaagaataaagaagacagctgttgcagagaagaaatcagca
ccgatcaaaaaattgactacacctacaactccaataaccaagaagttcaataaaaaacca
aataagaccattaaaaagttgaagtattctgagtcatcaagaattcctcctagctctggt
gaagggcagaagtggaccactttggtccatagtggtgtgatttttccgcctccatacaaa
cctcacggtgtcaagattctctataaagggaagcctgtcaacttgaccccggaacaggaa
gaggtggcgacaatgtttgcagtgatgcttgatactgagtatatggataagcctaagttc
aaagagaacttcatggatgactggcggaagattttgggaaaaaatcacattattcagagc
ttagaacactgtgatttcactccaatatatgattggcatcagagtgaaaaggagaagaag
aaacagatgacaacggaggagaagaaagctctgaaagaggagaaactgaagcaagaggaa
aaatatatgtgggccattgttgatggtgtgaaagagaaggttggaaacttcagagttgaa
ccacctggattgttccgcggccggggtgagcacccaaagatggggaaattgaaaaaaaga
attcgcccaagtgacataactatcaatattgggaaggatgctcctattcctgagtgtcct
atccctggccaaagctggaaagaaataagacacgataacacagtgacatggttagctttc
tggaacgaccccattaatccgaaggaattcaaatatgtttttcttgctgcaagtagtacc
ttgaaaggtcaaagtgacaaagagaagtatgagaaagccaggctattaaagaactatata
caaggtatccgcacagcatataccaaggactttacaagcaaagatcctactaagaaacag
atagcagtagcaacatatcttattgacaaactggctcttagggctggcaatgagaaggat
gatgatgaagctgacacagtaggttgctgtacgttaaaagttgaaaatgtggaaccagtg
cctccaaatatcttgaagtttgattttcttggtaaagattctataaggtatcagaatgaa
gtcgaggttgaagttgctgtgttcagggcaatccaagagtttcggaataggaaaaaaggt
ggagatgatatatttgacaaactagatactagtaaactgaatgctcatctaaaggaattg
atgcctggtctcactgccaaggtgttccgtacatacaatgcatctattacattggatgac
atgctgagcagggagacaaaagggggagaagttgctgaaaaagttgttgtctatcagcat
gcaaacaaggaggttgccatcatttgtaatcatcaacgtaccgtctcaaagtcccacagc
gctcagatgacgcgtttgaatgaaaagatagatgaactaaagggcgttttggaagaattg
aggacaaatttggctagggtcaaaaaggggaagccccctttgatgagttcggatgggaag
tcgaagaggagtttaaatcctgattcattggagaaaaagatatctcaaaccacagcgaag
attgaaaaaatggaaagagataaggatacgaaagaggatctaaaaactgtagcattgggt
acgtcaaagatcaactatcttgatcctaggatcaccgttgcatggtgcaaacgccatgaa
gttcctattgagaagatttttaacaagtccttactggcaaaattcgcctgggcaatggat
gtcgatccaggtttcagattctaa
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