Salvia hispanica (chia): 125188340
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Entry
125188340 CDS
T09851
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
shis
Salvia hispanica (chia)
Pathway
shis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125188340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shis03041
]
125188340
Spliceosome [BR:
shis03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
125188340
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
125188340
NCBI-ProteinID:
XP_047941077
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All DBs
Position
5:41255608..41259632
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AA seq
482 aa
AA seq
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MATLNDSFLADLDELSDNEDDLLEADNDDAEHMEEDVDGDLADIEALNYDDLDSVSKLQK
TQRFTDIMQKVEDALENGSENSTHGIVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIANEMDLTLVDLEGFLPSAIIMVVSVTASTTSGKP
LPEDVLQKTIDACDRALALDSAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKIIGTAGGL
SALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPSLRMRACRLLASK
STLAARVDSTRGDPAGKTGRTLRAEIHKKIEKWQEPPPAKQPKPLPVPDSEPRKKRGGRR
LRKMKERYAITDMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSKLAA
KVAKKFKDRSYGTSGATSGLTSSLAFTPVQGIELSNPQANQFGGTQSTYFSETGTFSKIK
RT
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcaactctgaatgactcttttctggctgatcttgatgaattgtctgataatgaagat
gatcttctggaagcagataacgacgatgctgagcacatggaagaagacgtagatggtgat
ttagctgatatagaagcacttaactatgatgatcttgatagtgtgtcgaagctacaaaaa
actcagcgatttactgacatcatgcagaaagttgaagatgcattggaaaatgggtctgag
aactccactcatggaattgttttggaagatgatccagagtatcagttgatagttgattgt
aatgccttgtctgtcgatattgaaaatgagattgtgataattcacaatttcatccgtgac
aagtatcgcttgaaatttccagaacttgaatctcttgttcaccacccaattgattatgcc
cgggttgttaaaaagattgctaatgaaatggatctgacgcttgttgatcttgaaggattt
ttaccgtctgctattattatggtggtttctgtcacagcatcaactactagtggaaagcct
cttccggaggatgtcttgcaaaagacaattgatgcatgtgatcgcgcacttgctctagat
tctgcaaagaaaaaggttcttgattttgtggagagtcgaatggggtatattgccccgaat
ctctcagccatagttggaagtgctgttgcggcaaaaataattggtacagctggtggtctt
tcggcattagcaaaaatgcctgcatgcaacgttcagcttcttggtgccaaaaagaagaat
ttagcagggttttcaacagcaacatcccaatttcgtgttggctatttggagcaaactgag
attttccagagtactccgccttccttaagaatgcgtgcttgtcgacttttggcttcaaaa
tccactcttgctgcacgtgtagactctactaggggagacccagctggaaaaactgggaga
actttgcgcgcagagattcacaaaaagatagagaagtggcaagagccgcctcctgctaag
cagcctaaaccacttccggttcctgattcagagcccagaaagaagagaggaggtcggcgt
ttaaggaagatgaaagaaagatatgctattacagacatgcggaagctggctaacaggatg
cagttcgggataccagaggagagttcactaggtgatggacttggcgaaggttatggaatg
ctcggtcaggctggtagtggaaagcttcgtgtatctgttggacagagcaaacttgctgct
aaagtagccaagaagtttaaggacaggagttatggaaccagtggtgcaacttctggactg
acatcaagtctggctttcacacccgtccagggaatcgagctttcaaatcctcaggcgaac
cagtttggaggaactcagagtacttatttttcagagactggaactttttcgaagatcaag
agaacatag
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