Salvia hispanica (chia): 125188346
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Entry
125188346 CDS
T09851
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit 4-like
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
shis
Salvia hispanica (chia)
Pathway
shis03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125188346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shis03009
]
125188346
03032 DNA replication proteins [BR:
shis03032
]
125188346
Ribosome biogenesis [BR:
shis03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
125188346
Prokaryotic type
125188346
DNA replication proteins [BR:
shis03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
125188346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
TruB_N
PUA
PUA_elF2D
UPF0113
Motif
Other DBs
NCBI-GeneID:
125188346
NCBI-ProteinID:
XP_047941089
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All DBs
Position
5:complement(11594789..11597035)
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AA seq
566 aa
AA seq
DB search
MSESQHLSSVKPKKKKNAEENDGQIETTDFLIKPQSFTPPVDTSEWPILLKNYDKLNVRT
GHYTPLPCGYSPLKRPLAEYIKYGIMNLDKPSNPSSHEVVAWIKRILRVEKTGHSGTLDP
KVTGNLIVCIDRATRLVKSQQGAGKEYVCVARLHSKVPEVSKVARALETLTGAVFQRPPL
ISAVKRQLRIRTIYESKLLEYDAERHLVVFWISCEAGTYVRTMCVHLGLLLGVGSHMQEL
RRVRSGIMGEKDNMVTMHDVMDAQWMYDNFRDESYLRRVIMPLEKILTSYKRLVVKDSAV
NAICYGAKLMIPGLLRFENDVEVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGTVAKI
KRVVMDRDTYPRKWGLGPKASMKKKLIAEGKLDKHGKVIGTAAPSEWARNVVLPAGGDSV
VAGEAATPAKAEEVAVLEEKKEKKSKKKKDEEGGESEKGHKRKVDAVDGSLVVEGVVKKK
KKVEAEDDANVEVETKEKKKKKKKGGGEVEAEAPASDEEKSEKKKKKKDKSDDNGVSVAA
AVEDEDSKSEKKKKKKKKHKDGEEKE
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaatctcagcacctctcctccgtgaaaccaaaaaagaagaagaatgctgaagaa
aatgacggccaaatcgaaacaaccgattttctgatcaagccgcagagcttcactccgcct
gtcgacacctccgaatggccgattctcctcaagaactacgacaaactcaatgtccgcacc
ggccactacacgccgctcccgtgcggctactcgccgctgaagcggccgctggcggagtac
atcaagtacggcatcatgaacctcgacaagccgtcgaatccgtcgtcgcacgaggtcgtg
gcgtggattaagcgcatcttacgggttgaaaaaaccgggcattccggcacactcgacccg
aaagtcaccggtaacctgattgtgtgcatcgaccgcgccactcggctggttaaatcgcag
cagggtgccgggaaggaatacgtctgcgttgctcgcctccactccaaggttccagaagtt
tccaaagtggctcgtgcgctggagacgctgaccggagctgtttttcagcggccaccgctg
atctctgctgtgaaaaggcagcttcgaatccggacgatctacgagagcaagctgctcgag
tacgatgctgagcgacatttggtggttttctggatttcctgtgaagctgggacgtatgtg
aggacaatgtgcgtgcatttggggctattgctgggagtgggatcgcatatgcaggagctt
cgaagggtgaggtcggggataatgggggagaaggacaatatggtaactatgcatgatgtg
atggatgcacagtggatgtatgataatttcagagatgagtcttacctgaggagggtgatt
atgccgttggagaagattttgaccagctacaagaggcttgtggtgaaggattcagctgtg
aatgccatttgttatggtgcgaagcttatgattccagggttattgcggtttgaaaatgat
gttgaggttggagaggaagtggtgctgatgacaacaaaaggggaggcgatagctttgggg
attgcagagatgactactgcggtgatggctacatgtgatcatgggacggtggcgaaaatc
aagagggtggtgatggatagggatacttatccaaggaaatggggtttggggccgaaggct
tcgatgaagaagaagctgattgcagaggggaagctggataagcatggtaaagtgattggg
actgctgcacctagtgagtgggccaggaatgtcgtgctgcctgctgggggtgattccgtg
gttgctggtgaggcagctacgcctgctaaagcagaggaggttgccgtgttggaggagaag
aaggagaagaaaagtaagaagaagaaggatgaagaaggaggtgaaagcgagaaaggacat
aagaggaaggtggatgctgttgatgggagtctggtagttgagggtgttgttaagaagaag
aagaaggttgaagcggaggatgatgcaaatgtggaggtggagacgaaagaaaagaagaag
aaaaagaagaaagggggtggtgaggtagaggcagaagctccggcctcggatgaggagaag
tctgagaagaagaaaaagaagaaagataagagtgatgataatggggtatctgttgcagct
gctgtggaggatgaggatagtaaaagtgagaagaagaaaaagaagaaaaagaagcacaaa
gatggtgaagaaaaagagtaa
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