Salvia hispanica (chia): 125188368
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Entry
125188368 CDS
T09851
Name
(RefSeq) protein argonaute 4-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125188368
03036 Chromosome and associated proteins [BR:
shis03036
]
125188368
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
125188368
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
125188368
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
125188368
microRNA pathway
RISC loading complex
125188368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
125188368
NCBI-ProteinID:
XP_047941122
LinkDB
All DBs
Position
5:complement(15439733..15446669)
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AA seq
909 aa
AA seq
DB search
MDPSEHDGNGASEALPPPPPVPPNVTPIKAVTEPEVKKVYRAPMARRGFGTRGNKVPILT
NHFKVNVNNVDGHFFHYSVALFYEDGRPVDGKGVGRKVLDRVHDTYDSELAGKDFAYDGE
KSLFTVGALPRNKLEFTVVLEDVTSSRNNGNSSPGGQGSPNESDKKRMRRPYQSKTFKVE
ISFAAKIPMQAIANALRGQESENSMEAFRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFA
DVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIIQPGPVADFLCANQNARDPFSLDWAK
AKRTLKNLRITTSPTNQEFKITGLSEKSCREQLFTLKQKSKDGDSEPVEVTVYDYFVKHR
NIDLRYSADLPCINVGKPKRPTYFPVELCSLVSLQRYTKALSTFQRSSLVEKSRQKPQER
MSVLSNALKINNYDAEPMLRSCGVTINSNFTQVEGRVLPPPKLKVAGGDDLFTRNGRWNF
NNKKFVNACKIERWAVVNFSARCDVRGLIRDLMKVGESKGIAVEEPFDVFEESQQFRRAP
PLVRVDKMFEEVQTKLPGPPKFLLCLLPERKNCDLYGPWKRKNLSDFGVVTQCLAPMRVN
DQYLTNLLLKINAKLGGLNSMLAGEISPSIPVVSKSPTLILGMDVSHGSPGQSDIPSIAA
VVSSRQWPSISRYRACVRTQSPKLEMIDSLYKRVSDTEDDGIMRELLVDFYTSSGKRKPD
QIIIFRDGVSESQFNQVLNIELNQIIEACKFLDENWNPKFVVIVAQKNHHTKFFLPNAPE
NVQPGTIIDNKVCHPRNYDFYLCAHAGMIGTTRPTHYHVLLDEVGFSPDDLQELVHSLSY
VYQRSTTAISVVAPICYAHLAATQLGQWMKFEDVSETSSSHNGTGPAAAPPVPPMPKLQE
SVRNSMFFC
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggatccatctgaacatgatggaaatggggcctcagaggctctccctcctccacctccg
gttcctccaaatgtaactcctataaaagctgttaccgaaccagaagtaaagaaagtttac
cgggccccaatggctagacgtggttttggaactagaggaaataaagttcctatcctgaca
aaccacttcaaagtgaatgtgaacaatgttgatgggcacttctttcactatagtgttgcc
cttttttatgaagatggccgcccagttgatggaaaaggtgttggtaggaaagtacttgac
cgagttcatgacacttatgattctgagttggctggcaaggattttgcttatgatggggaa
aagagtttgtttaccgttggtgcacttccccgaaataaacttgagtttactgttgtgctt
gaagatgttacttcaagtcggaacaatggaaatagcagtcctgggggacaaggaagtccc
aatgaaagtgataagaaaaggatgagacgtccgtatcaatccaaaaccttcaaagtggag
ataagttttgctgctaaaattcctatgcaagccatagcaaatgctttgcgtggccaggaa
tctgaaaactctatggaggccttccgggttttggatatcatcttaaggcaacatgctgct
aagcagggttgtctgcttgttcgtcaatcattcttccataatgatccaaagaactttgcc
gatgttggaggcggggttcttggctgccgaggctttcattcaagcttcagaactacgcaa
agtggcttgtcgttgaatattgatgtatctacgaccatgatcatccagccaggacctgtt
gccgactttctgtgtgccaatcaaaatgcgagagacccgttctcacttgattgggcaaag
gccaaacgcactctcaagaatttgaggatcacaactagtcctacaaaccaagagttcaaa
ataaccgggttaagtgaaaagtcttgccgtgagcaattgttcacattaaagcaaaaaagt
aaggatggtgattctgaaccagtagaagtgactgtatatgattactttgtcaagcaccgt
aacattgacctgcgatattctgctgatctgccatgcattaatgttgggaagcctaaacga
ccaacatatttccctgttgagctatgttctctggtctcattgcaacgttatacaaaagct
ctgtcaactttccaacgctcatcattggttgagaaatcacggcaaaagccacaggagagg
atgtctgtactgagtaatgctttaaaaatcaacaactatgatgctgaacctatgcttcgt
tcctgtggtgttaccatcaatagcaattttactcaggttgaaggccgtgttcttcctcct
cctaagctgaaagttgcgggtggagatgatttgtttactcggaatgggagatggaacttc
aataataagaaatttgttaatgcttgcaagattgagcgctgggctgtagtaaacttttct
gctcgctgtgatgtacgtggcctgatcagagatttgatgaaagttggtgaatcaaaagga
atcgctgtggaagaaccatttgatgttttcgaagaaagtcagcagtttagacgagcccca
cccttggttagagtggataagatgtttgaagaggtgcagacaaagcttcctggcccaccg
aaatttctactatgtttgcttccagaaagaaagaactgcgacttatatggtccatggaag
cgtaaaaacctgtctgattttggagttgttactcaatgcttggcacccatgagggtcaat
gatcagtatcttaccaatcttctgttgaagattaatgccaagcttggtgggttgaactct
atgttagctggtgagatatctccttcaataccagtggtatcaaagtctcccaccctgatt
cttggcatggatgtctctcatggctcacctggacaatctgatataccatcaattgctgct
gttgtcagctcaaggcagtggccttcaatttctcgctatagagcctgtgtgcgtacccaa
tctccgaagcttgagatgattgattcgctatacaaacgtgtgtctgacactgaagatgat
ggaataatgagggagcttctggttgatttctacactagttctgggaaaaggaagcccgat
cagataatcatcttcagagatggcgtgagtgaatcccaatttaatcaagttctgaatatt
gagctcaaccaaatcatagaggcctgcaaattccttgatgagaactggaatccaaagttt
gtggtcattgttgcgcagaagaaccatcacacaaaattttttctgccaaatgctcctgag
aatgtgcagccagggactataatagacaataaagtttgtcatccgaggaactatgacttc
tacttgtgtgcacacgctggaatgattggcacgactcggccgacacattaccatgtctta
ttggatgaggtgggcttttcaccagatgacttgcaagaactcgtccattccctgtcctat
gtgtatcagcgcagtactacggctatatctgttgttgccccgatctgctatgcacacttg
gcagccacccagttgggccagtggatgaaatttgaagatgtgtcagagacgtcatccagc
cacaacgggactgggccagctgctgctccaccagttcccccaatgcccaagttgcaggag
agtgtccgcaactcgatgttcttctgctag
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