Salvia hispanica (chia): 125188400
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Entry
125188400 CDS
T09851
Name
(RefSeq) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
shis
Salvia hispanica (chia)
Pathway
shis03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125188400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125188400
03009 Ribosome biogenesis [BR:
shis03009
]
125188400
Messenger RNA biogenesis [BR:
shis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
125188400
Ribosome biogenesis [BR:
shis03009
]
Eukaryotic type
Pre-60S particles
RNases
125188400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
125188400
NCBI-ProteinID:
XP_047941174
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All DBs
Position
5:complement(24917735..24922208)
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AA seq
252 aa
AA seq
DB search
MDKLSNSFSLLELDAEDAKEHNLTATIAADGCETRDSGKGVDNGLEDGTLLEKESVDQQS
SESIVGDYKMPLVWIDLEMTGLNIEVDRILEIACIITNGNLTKSVEGPDLVIHQSKECLD
KMGEWCQEHHGESGLTERVLQSTISEHEAENQVIEFVKRHTGTAYTPLLAGNSVYMDLIF
LRKYMPDLAALFSHNLVDVSSIKALCLRWYPRDRRKAPQKENKHRAMDDIKESIAELKFY
KENIFKPKKSRK
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggataagctctcgaattccttttcattgcttgagctggacgccgaagatgctaaggaa
cacaatctaactgccaccatcgccgctgatggttgtgaaacgagagatagtgggaaggga
gtagacaatggcttggaagatggaacactgttggaaaaagagagtgtggatcaacaaagc
tcagaaagtattgtgggagattacaagatgccactcgtgtggattgacctggaaatgact
ggtttaaacattgaagttgataggatcctggagattgcttgcattattacaaatggaaac
ttgaccaagtccgttgagggtccagatttggttattcatcaatcaaaggagtgtcttgat
aaaatgggagaatggtgccaagagcaccatggagagagtggtttgaccgagagggtcctt
caaagtacaataagcgaacatgaagctgaaaatcaggttattgaatttgtgaagagacac
accggcacagcatatacacctctgcttgctggaaattctgtctacatggatcttatattc
ttaaggaaatacatgccagatttggctgcccttttctctcacaatcttgttgatgtcagc
agtatcaaggcattatgtcttcgatggtacccaagagaccgtagaaaggctcctcaaaag
gaaaataaacacagagcaatggatgacatcaaggaaagcatagcagaacttaaattctac
aaggagaatatattcaaaccgaagaagtcgaggaaatga
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