KEGG   Salvia hispanica (chia): 125188408
Entry
125188408         CDS       T09851                                 
Name
(RefSeq) glycine-rich RNA-binding protein blt801-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
shis  Salvia hispanica (chia)
Pathway
shis03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125188408
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shis03019]
    125188408
   03041 Spliceosome [BR:shis03041]
    125188408
Messenger RNA biogenesis [BR:shis03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     125188408
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     125188408
Spliceosome [BR:shis03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    125188408
SSDB
Motif
Pfam: RRM_1 RRM_7 RBD_DEAH11 RRM_5 DNA_ligase_IV PHM7_cyt RRM_3
Other DBs
NCBI-GeneID: 125188408
NCBI-ProteinID: XP_047941188
LinkDB
Position
5:3751386..3753534
AA seq 245 aa
MALFRKAATILGRTVSSRINHETSVSNLSIFQAIRCMSSSKVFVGGLSYNTDEQSLRESF
DKYGEVIDAKVIVDRETGRSRGFGFVTFASAEEASAAIQALDQQELHGRQVKVNYANDRP
RGGFGGGGGYGGGGGYGGGGGYGGGGYGGGGGGYGGSGGGGYGGGGGGYGGSSGYGGSGG
GSFGGGADTGGYPAAGESQSGGGVTRGFGGDSGSYGSGEADGGFGGGEASYRDDDAQNNF
TDRRG
NT seq 738 nt   +upstreamnt  +downstreamnt
atggctttgttcagaaaagctgcaactattcttgggaggactgttagcagcagaataaat
catgaaacttcagtgtccaacctctctatttttcaagcgataagatgcatgtctagttca
aaggtttttgttggaggactttcttacaacacagatgagcaaagtcttcgagagtctttt
gataagtatggagaagttattgatgcgaaggtaattgttgaccgtgaaactgggagatcc
aggggatttgggtttgttacttttgcttctgctgaggaggcatcagctgccattcaggct
ttggatcagcaggaacttcatggtcgtcaggtgaaggttaactatgcaaatgataggcca
cgtggaggcttcggtggtggtggtggatatggtggaggcggtggttatggtggaggcggt
ggttatggtggtggcggatatggtggaggtggtggtggttatggtggcagtggtggtggc
ggatatggtggaggtggtggtggttatggtggaagtagtggttatggtggcagtggtggt
ggtagttttggaggtggagctgatactggaggctatcctgcagctggagagagccaaagt
ggtggtggtgttaccagaggcttcggtggtgattcaggtagctatggttcaggtgaagca
gatggtggatttggaggtggtgaggcaagctacagagacgacgacgcccagaacaacttt
actgatagacggggttga

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