Salvia hispanica (chia): 125188412
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Entry
125188412 CDS
T09851
Name
(RefSeq) ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic-like
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
shis03110
]
125188412
Chaperones and folding catalysts [BR:
shis03110
]
Heat shock proteins
HSP100
125188412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
UVR
Sigma54_activat
AAA_22
nSTAND3
TniB
NBD_SMAX1
AAA_14
Mg_chelatase
AAA_28
NACHT
AAA_18
Zeta_toxin
IstB_IS21
AAA_25
MazE_antitoxin
DNA_pol3_delta2
Motif
Other DBs
NCBI-GeneID:
125188412
NCBI-ProteinID:
XP_047941194
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All DBs
Position
5:5169738..5174829
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AA seq
924 aa
AA seq
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MAHSLLQPTRLHSSSTSSRQFTRSNESKRSSATMLCCSRSAPMRLSSFSGLRRANSVDAM
LHQGQHTFLSKVAAATTVNRRGRSSRMTPRAMFERFTEKAIKVIMLSQEEARRLGHNFVG
TEQILLGLIGEGTGLAAKTLKAIGIHLKDARIEVEKIIGRGSGFVAVEIPFTPRAKRVLE
LSLEEARQLGHNYIAPEHLLLALLREGEGVSARVLEALGADISNIRTQVIRMIGENQDPA
TVGGGDRSSGSNMPTLEEYGTNLTKLAEEGKLDPVSGRQEQIERVVQILGRRTKNNPCLI
GEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE
IRKSDDILLFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD
PALERRFQPVRVPEPTVDEAIEILKGLRERYEIHHKLHYTDEALVAAAQLSHQYISDRFL
PDKAIDLIDEAGSRVRLQHAQLPEDAKELEKFIRGVTKEKNEAIRSQDFEKAGELRDREM
DLRAKMSVLVEKNKEMTKAETEAGEGGPVVTEVDIQHIVSAWTGIPVEKVSIDESGRLLK
MEETLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALATY
YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK
AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNIGSNVIEKGGRRIGFDLDYNEK
DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKQISDIMLKEVFKRLEVRD
IELNVTERFRDRVVDEGYDPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS
DGKVVVLNGSSGVAPEPSPEPVVF
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggcgcattctctacttcagccaactagattgcattcctcttcaaccagctctaggcag
tttactcggtctaatgagagtaaaagatcgtcggcgactatgttgtgttgctcgcgatcc
gctcctatgagactgagcagtttctcaggattgcggcgagctaattccgttgacgccatg
ctgcaccaaggccagcacacgttcctatcgaaggtggcagctgcaaccaccgtcaataga
cgagggaggagttcgcggatgactccgcgagccatgtttgagcgctttacggagaaggca
atcaaggtcattatgctgtcacaggaggaggcgaggcgtctgggacataatttcgttgga
acggagcagatattgttggggctcattggtgagggcactggacttgctgcaaagactctt
aaggccattgggatacacttgaaagatgcccgtattgaggtggagaagataattggccgg
ggaagtggatttgttgctgtggagataccatttacccctcgcgctaagcgtgtgctggaa
ctctcgcttgaggaagcccgtcagcttggacacaattatattgcaccagagcacctgcta
ctggcattgcttcgtgagggtgaaggtgtttctgcacgtgtcctagaggctttaggtgct
gacatcagtaatattcgaactcaggtcattagaatgataggtgagaatcaagatcctgct
actgttgggggaggagatagaagctctggcagcaatatgcccactcttgaggagtatggt
accaatttaaccaagcttgcagaagagggtaaattagacccagtttctggaaggcaggaa
caaatcgaacgcgtcgtccagattttgggaaggcgcacaaaaaataatccttgccttatt
ggagaacctggtgttgggaaaacagctattgctgagggtcttgctcaaagaatagcaaat
ggagatgttcccgagactatcgaggggaaaaaggtgataacattggatatgggtctcctt
gttgctgggacaaaatatcgtggtgaatttgaagaaagattaaagaagttgatggaggag
attaggaaaagtgatgacattctacttttcattgatgaagtacacactttgattggagca
ggagctgctgaaggggctattgatgctgcaaacatcttgaagcccgcattagctcgaggt
gaactacagtgcattggggctactacactcgatgaataccgaaagcacattgagaaggat
cctgcactagaaagaaggtttcaacctgttagggttcctgaacctactgtagatgaggcc
attgaaattcttaaagggctccgggagcggtatgaaatacaccacaagcttcactacaca
gatgaagctttagttgctgcagcacaattgtcccatcagtatatcagtgaccgatttctg
cctgataaagctattgatttgattgatgaagctgggtcccgggtccgactccaacatgca
cagcttcctgaagatgcaaaggaactagaaaagttcatcaggggggtaacaaaggaaaag
aatgaagctattcgaagtcaagattttgagaaggctggagagctacgtgatagagaaatg
gatcttagggcaaaaatgtccgttcttgttgaaaagaacaaggagatgaccaaggcagaa
actgaggctggggaaggaggccctgttgttactgaagttgacattcagcatatcgtttct
gcttggacaggtatcccagttgagaaggtctcaatcgatgaatctggacgtctcctcaag
atggaggagacactccacacaagggtcatcgggcaggacgaggctgtcaaagccattagt
cgtgctattcgccgtgcccgggttgggttgaaaaatcccaaccgtcctattgctagcttc
atattttctggtcctactggtgtggggaaatctgaactagctaaagccctggctacctat
tattttggatctgaggaagccatgatccgacttgatatgagtgagttcatggagaggcac
actgtttcaaagctcattggttcacctcctggatatgttggttacactgaaggtgggcag
ctaaccgaggctgttcgccgtcgtccttacacagttgtgctttttgatgagattgagaaa
gcccatcctgatgttttcaacatgatgcttcaaattcttgaagatggtaggttgaccgac
agtaaaggtagaacagtagatttcaaaaatactcttctgatcatgacgtcaaatattgga
agtaatgtaatagagaagggaggccgtcgtattggttttgatctggattacaatgagaag
gacagcagttacaaccggatcaagagcctagtgactgaggagcttaaacaatatttcagg
ccagaatttttgaatagattggatgagatgattgtattccgacagctcaccaagcttgaa
gtgaagcagatatctgatattatgctgaaggaggtgttcaagagactggaagtcagggat
attgagcttaatgtgaccgagaggtttagagatagggtggttgatgaaggatatgatcca
agctacggagctagaccactcagacgagctataatgagattattagaggatagcatggca
gagaaaatgcttgcacgtgagatcaaagaaggtgattcagttattgttgatgttgattct
gatggcaaagtcgtagttctgaatggtagcagcggcgttgctccagaaccatctcctgaa
ccagtggtattctag
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