Salvia hispanica (chia): 125188465
Help
Entry
125188465 CDS
T09851
Name
(RefSeq) sister-chromatid cohesion protein 3 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shis03036
]
125188465
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
125188465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
SCD
STAG
PDS5
EspA
AT_hook
Motif
Other DBs
NCBI-GeneID:
125188465
NCBI-ProteinID:
XP_047941271
LinkDB
All DBs
Position
5:23024143..23032211
Genome browser
AA seq
1134 aa
AA seq
DB search
MEEEPVAPDTATRRSKRTRAEVRQADFTRTDRIEDELEDEREESSDEFQQPRPKAKRNRL
NEGASTSAAASRKADLSLIDVIKGDGKEIPEVVKRWVEHYERNQKSAMAELLTMLFEACG
AKYSILEENIEETDVDDVVVALVNMAKRGEVEDYQSSKRGFKNFKENLVYFWDNLVSECQ
NGPLFDQSLFDRCLDYIIALSCTPPRSYRQIASLMGLQLVTSFVNVAKILGPQRETTQRQ
LDAEKKKNIEGPRVESLTKRLSMTHEKITTLEEMMRKIFTGLFVHRYRDIDPDIRMSCIE
SLGVWVLSYPSLFLQDLYLKYLGWTLNDKSSAVRKISVLALQNLYEVDANVPSLNLFTQR
FYRRMLELADDIDISVSVCAIGLVKQLLRHELVPDEELGSFYDLLIDDPPEVRRAIGALV
HDHLIAQKFNNSQSHSTGSDSDSPEVHINRMLKILKEFSADPILSSYVIDDIWDYMGAMK
DWKCIIRMLLADNPSAELDDVDATNLIRLFFSSVRKAVGERIVPATDNRNPHHTKAQKEM
FENSKRDITVAMMKTYPQLLRKFMPDKDKVAPLVGIIPHMNLELYSLKRQEQNFRAVLKL
IREAFFKHGEKDNLRACVKAIKFCSSESQGELQDFAQNQIKDLEDDLVAKLKSAMKDVMN
GGDEYSLLVNLKRLHELQLLHKVPLDSLYQDLVHILKSFRNIDDEVVSFLFLNMFVHISW
CLHSILSSETVSEASLSSLLGKRDALLEELDYFLRNSFQLHSESRSKTQLAYWVCGILAD
TWCLFKRAKFSMTKLEILGYSPDVTVIEKYWRMCEQLLDVSDDAEDEEDEENREYTEETN
ADTVMFALAKLVATDTVAKEHLAPEVISHLGKYGASVTEIVKHLITLLKKKGDISNILLE
ALKRAYQRYLAAISSGDDETSSKQFQECKSLAARLSGPYVGAARNKYKAEILNIVREGIS
FAFSEAPKQLSFLDGAMLPFVSKLPPSDILDIMKGVERRTENVKTDEDPSGWRAYYTFLD
TLREKYLKNEAAKVADGKEGTTVRRRGRPRKQQTLQGKRLFDDQSSSEDEDPISGSDQDV
DAEDKEEEDELLIHSLRASSKLRSLRVSKSQTRTVDSSLAAEDLATPKTSGASS
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggagccagttgcgccggatacggctactcgtcgttcgaaaaggactagggct
gaggtcaggcaagccgatttcactcgcactgacagaattgaagacgaattggaggatgag
agggaagaatcttctgatgaatttcaacaacctcgcccgaaagctaagagaaatagactt
aatgaaggtgcttcaacttcggctgcagccagtcgtaaagccgacctcagcttgatcgat
gttatcaaaggtgatgggaaggagattccagaggtagtcaaaagatgggttgaacattat
gagaggaaccaaaagtccgcaatggctgaactcttaactatgctatttgaggcttgtgga
gcaaaatatagtatcctagaagagaatattgaagagactgatgttgacgatgtggttgtt
gctcttgtaaacatggctaaaaggggggaagttgaggattatcagagttccaaaaggggc
ttcaagaatttcaaagaaaatcttgtatatttctgggacaatttggtcagcgaatgtcag
aatggaccactgtttgatcagtcactatttgatagatgtttggactacatcattgcgttg
tcatgtactcctcctagaagttatcgtcagattgcatctttgatgggacttcaacttgtc
acatcctttgtcaatgtagctaaaatccttggtccgcagagggaaaccactcagagacag
ttagatgctgaaaagaagaagaatattgaaggacctcgagtggagtcgctcactaaaagg
ttatcaatgacacatgagaagataactacgttggaagagatgatgaggaaaatctttact
gggctattcgtgcatcgttaccgagacattgatccagatattcgaatgtcgtgcatcgag
tcacttggcgtgtgggtactgtcatatccctcacttttcttgcaggatttatatttaaag
tatcttggatggacattgaatgacaaaagttctgctgttagaaagatttctgtcctggca
ttgcaaaatctttatgaggtggatgccaatgtgccatctctgaatcttttcactcagaga
ttctacagaaggatgcttgagctggctgatgatattgacatttctgtttcagtatgtgca
ataggcctcgtaaaacagttgttaagacacgaacttgtgcctgatgaagaactaggctct
ttctacgacttattaattgatgacccacctgaagtccgacgcgccattggagcactagta
catgatcatttgattgctcagaaatttaacaattcacaatctcactcaacaggcagtgac
agtgattctccagaggtccacattaatagaatgctgaagatactcaaagaattctcggct
gatcccattctgagttcatatgtcattgatgatatctgggattacatgggggccatgaaa
gattggaagtgcatcattcgtatgcttctggcagataatccatcggccgagcttgatgat
gtagatgctacaaatttgattcggctcttcttctcatcagttaggaaagctgttggagag
aggattgttcctgctactgacaatagaaacccacatcataccaaagctcagaaggaaatg
tttgaaaacagtaagcgcgacataacagttgccatgatgaagacctatccccagctcttg
cgcaaatttatgcctgacaaggacaaagtagctcctttagtaggaattattccccacatg
aatcttgagctttattctcttaagagacaggaacagaacttcagggctgttcttaaactt
ataagagaggcctttttcaagcacggggagaaagataatttgagagcatgtgtgaaagca
attaagttctgttcctctgagagtcaaggggaattgcaagactttgcccaaaatcagatc
aaggatcttgaagatgatttggttgccaaactaaaatcggctatgaaagatgttatgaat
ggtggggatgaatactccttgcttgtaaatctgaaaaggttgcatgaactccagttgttg
cacaaagttcctctagacagcttgtatcaagaccttgtgcatattcttaagagtttcagg
aacatagatgacgaggttgtttctttcttgtttctgaatatgttcgttcatatctcttgg
tgcctgcactccattctatcaagtgaaacagtttcagaggcatctttatcttctctatta
gggaagcgtgatgccttgttggaggaacttgattactttttacgtaactcttttcaactt
catagtgaaagtaggtccaaaactcagctggcatattgggtctgtggtattctggcagat
acctggtgtttgtttaaaagggctaaattttctatgacaaagctggaaatattagggtac
agtccagatgtaacagttattgaaaagtattggaggatgtgcgagcaactgcttgatgtt
tcagatgatgcagaagatgaagaagatgaagaaaacagagaatatactgaggagactaat
gcagacacagttatgtttgctctggccaaattagtggctactgatacagttgctaaggaa
catcttgccccagaggtcatctctcatctggggaagtatggtgctagtgtcactgagata
gttaagcatctaattactctcttaaagaaaaagggcgacatctcaaatattcttctggaa
gccttaaaaagggcataccaaaggtatctggcagcgatttcctctggtgatgatgaaaca
tcaagcaagcaattccaggagtgtaaaagtcttgccgctcggctgtctgggccgtatgtt
ggtgctgctcgaaacaagtataaagctgaaattttgaatatagtcagagaaggaatcagt
tttgcattttcagaagcaccaaagcagctgtcatttcttgatggtgcaatgctgcctttt
gtatccaaacttcctccgtctgacatacttgacattatgaaaggagttgagagaagaact
gaaaatgtgaagacagatgaagatccaagtggttggcgtgcttattacacatttctagac
acccttcgggagaaatatctgaaaaatgaagcggccaaagttgcagatggtaaagaaggc
acaactgtgagacgacgtggtcgtccacgcaagcagcagaccctacaaggaaagagactt
tttgatgatcaaagttcaagtgaagatgaagatccgattagtgggtctgatcaggatgta
gatgctgaagacaaggaagaagaggatgaactactgatacattcacttagagcatcatcc
aagctaagatcattaagggtttctaagagccagacaagaacagtagacagtagccttgca
gcagaggacttggcaaccccaaagacttcaggggcatccagttag
DBGET
integrated database retrieval system
