Salvia hispanica (chia): 125188502
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Entry
125188502 CDS
T09851
Name
(RefSeq) crossover junction endonuclease MUS81 isoform X1
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
shis
Salvia hispanica (chia)
Pathway
shis03440
Homologous recombination
shis03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125188502
03460 Fanconi anemia pathway
125188502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shis03400
]
125188502
DNA repair and recombination proteins [BR:
shis03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
125188502
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
HHH_8
EME1-MUS81_C
EarA
HHH_3
BCAS3_WD40
Motif
Other DBs
NCBI-GeneID:
125188502
NCBI-ProteinID:
XP_047941321
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All DBs
Position
5:33247986..33255794
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AA seq
660 aa
AA seq
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MDSARKTACPENEDVAAYLMNKRHELAQSSKGISDNMDMTLSKAHSNICNHQNPIRNLKD
LAQIKGVGKWILKQMQGFFHADGDPSEIEDLTKKGNKNKGPKRYVPQKNSVAYALLISLF
RGTENGNEFMHKKELIDAAETSGLSRVPIAPEKAKEKAGHFGSSPRDWYTGWNCMKTLIS
RGLVVKSSCPAKYMLTEEGKEVAHECLLRSGMVGPNKKFDGLERCPDLVQRDKVSVVDLH
EDLPDVECVKKKAKISVDIPPDYLEKGTDISSLDFLQEDDIDSISFISKSRTDGHYASSS
LFQLRDGRAGTNSGDMQRHANDVPSNKSSLLHTFGRSSCTLKPCSSNNVQENVTSQPGFQ
GSEANPIALATPPLAFGEKFGDVYEVVLLLDNREQFAMQGSRSRKIIENICSLFQIQIEV
RRLPVGDGIWIARHKYLGSEFVLDFIVERKKVDDLRQSIRDNRYRDQKMRLVRCGLKKMI
YLVEGDPNSSEAAESIKTACFTTEILEGFDVQRTNGLADTLKKYGNLTQSINQYYRSLDT
MQQCIGGCPPFDEFIKRCEDLGKMTVSDVFGIQLMQVWLIFQMLNRHNCSLFPACLHVSQ
VTEEIALAVLDMYPTLLSLASAYSLLEGDAIAQEEMLKRQSNNLISGPASKNIFQLIWGG
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggatagtgcaagaaagactgcgtgcccggaaaatgaagatgtggcggcgtatttgatg
aacaagcggcacgaattggcgcagagttccaaggggatttccgacaatatggacatgacg
ctttcaaaggcccattcaaacatctgtaaccaccaaaacccaattagaaacctcaaagac
ttggcgcagattaagggcgtgggtaagtggattttgaagcagatgcagggtttttttcat
gcggatggtgatccttctgagattgaagacttgacgaaaaagggaaataaaaataaggga
ccaaagcgttatgtgccacaaaagaattctgttgcttatgctctactaatttcacttttc
aggggaacagaaaatggaaatgaatttatgcacaaaaaggaactcatcgatgctgctgaa
acaagtggattatctcgtgtaccaattgcgccagaaaaggcaaaggaaaaagctggacat
tttgggagctcgccgagggactggtacactggatggaactgtatgaaaacactgataagt
agaggccttgttgtgaagtccagttgcccagctaagtatatgttgacagaagaaggaaaa
gaagtagcacatgaatgcctattgagatctggtatggttggtcctaataagaaatttgat
ggtctggaaagatgtccagatttggtccaaagagacaaagtgtctgttgttgatttgcat
gaagacttgccagatgtagagtgtgtgaaaaagaaggcaaagatatctgtagatattcca
cctgattatcttgagaagggaacagacatatcatcacttgatttccttcaagaagatgat
attgatagtataagtttcatctcgaaatcaagaacggacggccattatgcatcatcatct
ttgttccaacttagagatggtagagcagggacaaattcaggtgatatgcaaagacatgca
aatgatgttcctagcaataaaagttcgttgcttcatacttttggacggagttcttgtact
ttgaaaccgtgctcatccaataatgttcaggaaaatgttactagccagcctggcttccaa
ggatcagaagctaatcccattgctttggcaacaccgcctttggcatttggagagaagttt
ggggatgtttatgaagtagttctgctattagacaaccgggagcaatttgctatgcaagga
tcacgttcaagaaaaattattgagaacatatgctctctgtttcaaattcagatagaggtt
agaaggctgcctgtgggtgatggaatttggatagctcgtcataagtatcttggaagtgaa
ttcgtacttgattttattgttgagaggaagaaggttgatgatttgcgtcagtcaataagg
gacaataggtatcgagatcagaaaatgcggcttgtgcgatgtgggcttaagaagatgata
tatctggtggaaggtgatccaaattcctcagaggcagctgaaagcatcaaaacggcttgc
ttcacgactgagatcttggagggttttgatgtgcaacgaactaatggactagctgataca
ttgaaaaagtatggtaatcttactcaatcaatcaaccaatactacagatctctagatacc
atgcaacagtgcattggtggatgccctccttttgatgaatttatcaaaaggtgtgaagac
ttgggtaaaatgacagttagtgatgtatttggtatccagctcatgcaggtatggctcata
ttccagatgctcaatcgacataattgttcactattcccagcatgtctacatgtttcccag
gtaacagaggaaatagctcttgctgttttagatatgtacccaacattgttgtcccttgct
tctgcgtattctcttctggagggtgatgctattgcacaagaggaaatgctcaaaaggcag
agcaacaacttgatcagtgggcccgccagcaaaaatatattccaattaatttggggtggt
taa
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