Salvia hispanica (chia): 125188601
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Entry
125188601 CDS
T09851
Name
(RefSeq) actin-interacting protein 1-2 isoform X1
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
shis04990
]
125188601
Domain-containing proteins not elsewhere classified [BR:
shis04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
125188601
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
NBCH_WD40
RMC1_N
Beta-prop_TEP1_C
eIF2A
Beta-prop_SPT8
Beta-prop_IP5PC_F
WD40_like
Beta-prop_DCAF12
Beta-prop_Vps41
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
125188601
NCBI-ProteinID:
XP_047941501
LinkDB
All DBs
Position
5:12438887..12446632
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AA seq
610 aa
AA seq
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MAELKETFACVPSTERGRGILISGDPKTNSILYTNGRSVIIRYLDRPLEVKVYGEHMYPA
TVARYSPNGEWIASGDVSGTVRLWGTHNDFVLKKEYRVLSGRIDDLQWSADGERIVACGD
GKGTSFVRAFVWDSGSNVGEFDGHSKRVLSCAFKPTRPFRIVSCGEDFLVNYYEGPPFKF
KMSHREHSNFVNCIRFSPDGTRFITVSSDKKGVLYDAKTGEMNGELTSEDGHKGSIYAVS
WSPDSKRVITVSADKTAKVWEVSADSNGNLVKTLTCPGSGGVNDMLVGCLWQNDHIVTVS
LGGSIFLYSSTDLDKAPLELSGHMKNINSLVLLKGVPQIILTTSFDGQIIKWLQGKGFSG
KLERNVSTQIKCFEALEGEIVASGFDNKVWRIPMLGDQCGDADSVDISCQPSDLSLAILS
PDLVMVSHDTGVTLLHGTKVVSTIDLGFTATACSIAPNGNEAVVGAKDGKLHVYSVLGDT
LKEEAVLEKHRGPITVIHYSPDISMFASADSNREVVVWDRATHEIKLKNMLYHTARVNCL
AWSPNNELIATGSLDTCVIVYKIDKPADQRITIKGAHLGGVYGLAFSDDNTVVSSGEDAC
VRIWKVTPPQ
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctcaaggagactttcgcgtgcgtgccgtcgacggagcgcggccgcggcatt
ttgatttcaggcgatccgaaaacgaactcaatcctctacaccaacggccgatccgtcatc
attcgctacctcgaccgcccgctcgaggtcaaggtctacggcgagcacatgtaccccgcc
accgtggcgcgctactcgcccaacggcgagtggatcgcctcgggcgacgtgtccggcacc
gtgcggctctgggggacgcacaacgatttcgtcctcaagaaggagtaccgtgtcctctcg
ggccggatcgatgatctccagtggtctgccgatggcgagcgcattgtcgcatgcggcgac
ggcaaggggacatccttcgttcgcgcatttgtgtgggactcaggaagcaatgttggagaa
tttgatgggcattcaaaaagagttttgagttgtgcctttaagccaacaagaccttttcga
attgtatcatgtggcgaggactttttggttaactattatgaaggacctccatttaagttc
aagatgtcacacagggaacactcaaattttgtgaattgcattcgcttttctcctgacggg
accagatttattactgtaagctctgacaaaaagggtgtactttatgatgcaaagactgga
gaaatgaatggggagctgacttctgaggatggtcacaagggcagtatatatgcagttagt
tggagtcctgacagcaaaagggtcataacagtgtctgctgacaaaactgccaaggtgtgg
gaggtatctgctgatagtaatggaaatctggtaaaaacattgacgtgtcctggatctggt
ggagtaaatgacatgctagttggttgtctatggcagaatgatcacatagtcactgtttct
cttggtggcagtatttttctgtactcttccactgatcttgacaaagctcctctagaatta
tctggacacatgaaaaatattaattcactagtactgctgaaaggtgtcccccaaattata
ctaacgacaagtttcgatggccaaataattaagtggcttcaaggtaaagggttctctgga
aagctagaaaggaatgttagcactcaaattaaatgttttgaagctcttgaaggagaaata
gtggcatcaggatttgacaacaaggtttggagaattcctatgcttggagaccaatgtggg
gatgcagatagtgttgatatttcctgtcagcccagtgacttgagtcttgccattctttct
cctgatcttgtaatggtttcacatgatactggtgttacactcctccatggtacaaaagtt
gtatccactattgatctggggttcactgcgacagcatgtagtattgcacctaatggaaat
gaagctgttgtgggtgctaaggatggaaaattgcatgtctactctgtcctgggtgataca
ctgaaagaagaggctgtacttgaaaaacatcgaggtcctatcactgtcattcactactca
cctgatatttccatgtttgcatctgctgattctaatagagaagttgtcgtttgggatcgt
gctactcatgagataaagcttaaaaatatgttataccatacggctcgagtaaactgcttg
gcctggtctcctaataacgagttgattgcaactggatcactcgacacatgtgtcattgta
tataaaatagataagccagcagatcagcggataactatcaaaggagctcacttgggtgga
gtttatggattggcttttagtgatgacaacactgtagttagttctggtgaggatgcttgt
gtccgcatatggaaggtgacaccgccacagtga
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