KEGG   Salvia hispanica (chia): 125188609
Entry
125188609         CDS       T09851                                 
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
shis  Salvia hispanica (chia)
Pathway
shis03420  Nucleotide excision repair
shis04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    125188609
  09124 Replication and repair
   03420 Nucleotide excision repair
    125188609
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:shis04121]
    125188609
   03400 DNA repair and recombination proteins [BR:shis03400]
    125188609
Ubiquitin system [BR:shis04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     125188609
DNA repair and recombination proteins [BR:shis03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      125188609
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      125188609
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd Beta-prop_RSE1_1st CPSF_A
Other DBs
NCBI-GeneID: 125188609
NCBI-ProteinID: XP_047941511
LinkDB
Position
5:complement(2731192..2739311)
AA seq 1089 aa
MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLSPQGLQPMLDVPIYG
RIATLELFRPHGETQDLLFIATERYKFCVLQWDAETGEVITRAMGDVSDRIGRPTDNGQI
GIVDPDCRLIGLHLYDGLFKVIPFDTKGQLKEAFNIRLEELQVLDIKFLYGCPKPTIVVL
YQDNKDARHIKTYEVNLKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYS
SAQAFKAIPIRPSITRAYGRVDADGSRYLLGDHNGLLHLLVITHEKEKVTGLKIELLGET
SIASSISYLDNAVVFVGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSATDDPYDTFLVVS
FINETRILAMNIEDELEETEIEGFCSNVQTLFCHDAAYDQLVQVTSSTVRLVSSTTRELR
NEWFAPEGYSINVATANVTQVLLATGGGHLIYLEIGDGVLREVKHIQLEYDISCLDINPI
GDNKNCSQLAAVGMWTDISVRIFSLPDLNLVTKELLGGEIIPRSVLLCAFEGISYLLCAL
GDGHLLNFVLNTSNGELTDRKKVSLGTQPITLRTFSSKNATHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSYMCPFNTAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICH
QEQTRTFAICSLKYNQSAADDSEMHFVRLLDDQTFDFISTYPLDQFECGCSVLSCSFSDD
PNVYYCVGTAYVMPEENEPTKGRVLVFTVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI
NQKIQLYKWMRRDDGTHELQSECGHHGHILALYVQTRGDFIVVGDLMKSMSLLIYKHEEG
AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL
GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHDQYVLLEKLQMNLRKV
IKGVGGLSHEQWRSFYNEKKTVEAKSYLDGDLIESFLDLNRSKMEEISKSMNVPVEELMK
RVEELTRLH
NT seq 3270 nt   +upstreamnt  +downstreamnt
atgagtatatggaattacgtggtgacagcgcacaagcctaccaacgtcacgcattcgtgc
gtcggcaatttcaccagcccgcaggagctcaatcttataattgcgaaatgcactcggata
gagattcatttgctctcgcctcaaggcttacagcctatgttggatgtgccgatatatggg
agaattgccacgctcgagctttttcgcccacatggagaaacacaagatctccttttcata
gctacagaaagatataaattctgcgttttgcaatgggacgcagagactggcgaggttatc
acaagggccatgggtgatgtttctgatcggattggtcgacccacagataatggacagatt
ggaatagttgatccagattgcaggttgattggtcttcatctatatgatgggttgttcaag
gtcatcccatttgatactaaaggccaactcaaagaggcatttaatatcaggctcgaggag
cttcaggttttagatatcaagtttctgtatggttgccctaagccgaccattgttgtactt
taccaggataacaaggatgctcgtcacattaaaacatatgaagttaatttgaaggataaa
gattttgttgaaggtccatggtctcaaaacaatctcgacaatggggcagatttgttaatc
ccagtgccacctcctctctgtggtgtcctcattatcggtgaagaaacaatcgtgtatagc
agtgcccaggctttcaaagctatcccaattagaccttctattacaagagcctatggaagg
gttgatgcagacggttcacgctatttattgggagatcataatgggcttttgcatctactt
gttataactcatgaaaaggagaaagtaaccggactcaaaattgagctcttgggggaaaca
tctattgcatcgtccatatcatatcttgataatgccgttgtttttgttggctcaagttat
ggagattcacagctcataaagcttaatcttcaaccggatgcaaaaggttcttatgtggaa
gttcttgaaagatatgtcaatttggggccaattgttgatttctgcgtggttgacttggaa
aggcaaggccaaggtcaagttgtaacttgctcaggtgcctataaggatggttctttgcgc
attgtgcgaaatggtatcggaataaatgaacaggcatctgtagagcttcaaggcatcaaa
ggcatgtggtcgctgcgatcagctactgatgatccatatgatactttcttagttgtcagc
tttatcaatgagacacgtattttggcaatgaatattgaggatgaattggaggaaactgag
attgaaggtttttgttccaatgtacagacactgttttgtcatgatgctgcatatgatcaa
cttgttcaggttacttcaagtacagtgagactagtcagttctaccaccagagagcttcgt
aacgaatggtttgctccggaaggttattcaatcaatgttgccacagccaatgtcactcag
gttctattggctactggtggtgggcatttgatttatctagaaattggtgatggtgttcta
agagaagtgaaacatatccagttggagtacgacatctcatgcctggacatcaatccaatt
ggtgataacaaaaactgcagtcaactagctgcagttggaatgtggacagatattagtgtt
aggatattttcacttccagacttgaaccttgtaacaaaggagcttttgggaggggagatc
attcctcgttctgtacttttgtgtgcttttgaagggatatcttatctgttatgtgctctt
ggggatggacacctgttgaattttgtgttgaataccagcaatggcgagctgacagacagg
aagaaagtttctttagggacccaaccaattacactgcgaactttctcatcaaagaatgcc
acacatgtatttgctgcttctgatagaccgactgtcatctatagcagtaacaagaaattg
ctttacagcaatgtaaatctgaaagaagtaagttatatgtgccccttcaacacagctgct
ttccccgacagccttgctattgctaaagagggcgaactaacaattggaaccatagatgat
attcaaaagcttcacatacgctcgatcccacttggggagcatgcacggcgtatatgtcat
caggaacaaacacggacatttgccatttgtagtttaaaatataaccagtcagctgcagat
gactctgaaatgcacttcgtccgcctgttagatgaccagacattcgacttcatatctacc
tatccactggatcaatttgaatgtggttgttctgtccttagctgctcattctctgatgac
cctaatgtctactactgcgtggggactgcatatgtaatgccggaagaaaatgaacctact
aagggtcgggttttagttttcactgtagaagatggaaaacttcaactaattgctgagaag
gaaaccaaaggcgctgtttattctcttaatgccttcaacgggaaactgcttgcggccatt
aatcaaaagatccagctgtataagtggatgcggcgggatgatggcactcatgaattgcaa
tctgaatgcggacatcatggccacatacttgccctttatgtacaaactagaggggatttc
attgtagttggtgatctgatgaaatcaatgtcgttgctgatttacaagcatgaggagggt
gctatcgaggagcgagctcgtgactacaacgccaattggatgtcagctgtcgagattctg
gacgatgacatttaccttggagcagagaataatttcaatctcttcactgtccgtaaaaac
agtgaaggagcaactgacgaggagcgtgggcgcctcgaggttgttggcgaataccatctt
ggcgaattcgtcaaccgcttccgacacggttcactagtcatgcgtctgccagattccgat
gttggccaaatcccaacagtcatattcggcactgtcaatggagtgatcggggtcattgcc
tctctcccccatgatcagtacgtcctcttggagaagctgcagatgaatctgcggaaagtg
atcaagggcgtggggggcctcagccacgagcagtggagatccttctacaacgagaagaag
accgttgaagctaaaagctacttagacggagatttgatcgaatcattccttgatctcaac
aggagtaagatggaggagatttcaaagtcgatgaatgttcccgtggaagaacttatgaag
agagtggaagagctgactaggttacattaa

DBGET integrated database retrieval system