Salvia hispanica (chia): 125188651
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Entry
125188651 CDS
T09851
Name
(RefSeq) pleiotropic drug resistance protein 3-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
shis
Salvia hispanica (chia)
Pathway
shis02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125188651
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shis02000
]
125188651
Transporters [BR:
shis02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
125188651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
SMC_N
AAA
ABC2_membrane_3
RsgA_GTPase
AAA_16
AAA_18
AAA_29
AAA_25
AAA_22
AAA_23
Rad17
TsaE
AAA_30
nSTAND3
ATPase
NACHT
AAA_28
AAA_5
RNA_helicase
RuvB_N
ORC-CDC6-like
PduV-EutP
AAA_17
NTPase_1
NPHP3_N
SRPRB
ATPase_2
AAA_7
AAA_19
AAA_11
Motif
Other DBs
NCBI-GeneID:
125188651
NCBI-ProteinID:
XP_047941582
LinkDB
All DBs
Position
5:25651775..25660654
Genome browser
AA seq
1317 aa
AA seq
DB search
MAMAIPAVEVRYKELRVEAECEVVKGKPLPTLWNSLKLGATRLLGLNSRKTHINILDDVS
GIIKPGRMTLLLGPPGCGKTTLFKALSSNLRRSLKMTGEISYNGYNLQDFVVQKVSSYVG
QYDQHIPEITVRETLDFSGRCQGIGNRAEILMKLAKREKEENIVPDPNVDTFPKGISVEG
EKTSLQTDYILKILGLDICADTLVGDAMRRGISGGQKKRLTLGEMLVGPTNVFFMDEISN
GLDSSTAYQIVSFLQQLCHATDATIIVSLLQPAPEIYDLFDDIIFMAEGKIVYHGPRDEV
LEFFDTCGFKCPGRKEVACFLQEVIAPKDQEQYWYKSWEKYNYVSVHMFSRKFKESRRGC
KLTEELSAPSDKSKSQNESFNFNAYSLKKWDLFSTCMSRELLLMKRNSFVYVFKSVQLVI
LASITMTVFLRTQMSIDLLHANSYLGALFYSLIILVVDGIPELSMTIGRLGVFYKQRDLH
FYPAWAYAVPATILKIPLSLLESLLWTCFTYYTIGYSPEVGRFFRQMMMFFAVHFSSISL
FRFVAAVCQTVVVSAAASSIVILFMFLLSGFMIPKSSMPIWLKWAFWISPLSYGEIGLSL
NEFLAPRWQKQLSGNSTIGRQTLENHGLNHDGHFFWISLGVMFGFVLLFNIGFTLASSVL
KPPGSRAIISIKKLSALREKEVVCNVHSQKQTGISSASSSAESHRGRAVLPFEPLSIVFQ
DVQYYVEPPKTMKKHGVSQKRLQLLHNITGAFRPGVLTALMGVSGAGKTTLLDVLAGRKT
CGTTEGVIKIGGYPKVQSTYSRISAYCEQTDIHSPQITVEESVIFSAWLRLDSQIDPKTK
SEFVKEVLETIELDGIKDALVGVAGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLD
ARAAAIVMRAVKNVADTGRTIVCTIHQPSIDIFEAFDELLLLKAGGCMIYSGPMGHCSSK
VIEYFEGISGVPKIKDGCNPATWILEVTSASSEAELGIDFGQIYVGSTLHEDNKELVKRL
GMPASGSKDLHFPTRYAQNGWGQFTTCLWKQHWSYWRSPSYNLHRTTYMLNASFLFGFLF
WGQGKKLHDQQSLLTLLGSTYCSIIFCGIQNCQSVLPYINRERTVFYREVFAGMYASWAY
SAAQVIVEIPYVFVQVLVFTVITYPMIGYQFSAYKVFVYFYCMFCTLLSYTYLGMLLIAI
TPSFPVAATLQSAFYTTFNLFAGFFIPRPQIPKWWIWLYYVVPTSWSLKGVVTSQYGDVE
KEIAVFGERKTVAGFLTQYFGFQHNMLPLVIPVLTCYPILFAFLFAYCIRKFNYQRR
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggcgattccagcagtagaggttcgatacaaggagttgagggtggaggcagag
tgtgaagttgtgaaggggaagcctctcccaactctttggaattcactcaaattgggtgca
acgaggcttcttggtttaaactcaagaaagacacacataaatattcttgacgatgtaagt
ggcatcatcaagcctggaagaatgactttactacttggtcctccaggctgtgggaagact
acattatttaaggctctttcatcaaatctcaggagatcgctcaagatgacaggggagatt
tcgtacaatggatataatctccaagactttgtagtacaaaaagtttcttcatatgtaggc
caatatgatcagcatatccccgaaattactgttagagaaacactcgatttttcaggtcgt
tgtcagggaattggaaatagagcagaaattttgatgaagctcgccaaaagggagaaagag
gaaaatattgttccagaccctaacgttgatactttcccgaagggaatttctgtggaagga
gagaagacaagtcttcaaactgactacattctgaaaattcttgggcttgacatctgtgct
gacacgctcgttggagacgccatgagaagaggcatctcaggtggtcagaagaaaagactc
acactaggtgagatgcttgttggaccaacaaatgttttctttatggatgaaatatcaaat
ggtttagacagctcaacggcataccagatcgtttctttccttcaacaactatgtcatgcc
actgatgctaccataattgtttcacttctccagccagctccagaaatctatgatctattt
gatgacatcatcttcatggctgaaggaaagattgtctatcatggaccacgagatgaagtt
cttgagtttttcgacacttgtgggttcaagtgtcctggaaggaaagaagtcgcctgtttt
cttcaggaggttattgctccgaaagatcaagagcagtattggtacaaatcttgggaaaaa
tacaactatgtttcagttcatatgttctcaaggaaatttaaggagtctcgccgcggatgt
aagcttactgaggagctatctgcaccttccgataagtccaagagtcaaaacgaatccttc
aattttaatgcgtattcacttaaaaaatgggatctttttagcacctgcatgtcaagagaa
cttcttctgatgaaaaggaattccttcgtttacgtattcaaatctgtccagctggtcata
ctggcatctattacaatgacagtatttttgaggacacagatgagtatcgatcttctccat
gcgaatagttacttgggagctctgttttactctttgattattctagttgtcgatggtata
cctgagctctccatgactattggaaggcttggagttttctacaaacagagagacttgcat
ttctaccctgcatgggcatatgcagttccagctaccattctcaagattccactctcgtta
ttagaatctttgctttggacatgctttacttactacacgattggctatagcccggaggtt
ggcaggttcttccgccaaatgatgatgttctttgctgttcacttttcctctatatcattg
ttccgttttgtggcagcagtctgccagaccgtggttgtatctgcagcagctagtagtata
gtaatattgtttatgtttcttctaagtggcttcatgatcccaaagtcttccatgccaatt
tggttgaagtgggcattttggatttccccattatcatatggggagataggcctttcttta
aatgaatttctagctccgagatggcagaagcaactatctggtaattccacaatcggacgt
caaacactggaaaatcatggcttaaatcacgacggacatttcttttggatatctcttggt
gtcatgtttggctttgtgctccttttcaatattgggttcacactggcctcgagtgtcttg
aaacctcctggttctcgtgctattatttcaatcaagaaactctctgcactacgtgaaaaa
gaagtggtctgtaacgtccattcacagaaacaaactggaatttcttctgcaagctctagt
gctgaatctcatagaggtagagctgttttaccgtttgaaccactaagtatagtgttccaa
gatgtgcaatactatgtagaacctcctaagacaatgaagaagcacggagtctctcagaaa
agacttcaacttcttcacaatattactggtgcatttagacctggtgttctaacggcactc
atgggtgtcagtggagctggaaaaactacacttcttgacgttcttgctggtagaaaaaca
tgtggaactacagaaggagtgataaaaatcggaggctatccaaaagttcaaagcacatat
tctagaatttcagcatattgtgaacaaactgatatacattctcctcaaatcaccgtggaa
gaatcagtcattttctctgcgtggctacgtcttgattcccaaattgacccaaagacaaaa
tcagagtttgtaaaagaagttctggaaaccattgagctcgatggaatcaaagatgcactg
gtgggcgttgcaggtgttgatggtctttcaactgagcaacgcaaacggttgacaatagct
gtggaacttgttgctaacccttcaatcatctttatggatgaacctacaactggtctggat
gccagagcagcggcaattgtcatgcgtgcagtcaagaacgtagctgataccgggagaaca
attgtttgcaccattcatcaaccaagcatagatatatttgaagcatttgacgagttgtta
cttctcaaagctggagggtgcatgatctattctggacccatgggacattgctcctctaaa
gtgattgaatattttgagggtatttctggagtgcctaaaattaaagatggatgcaatcct
gctacgtggatactagaggtgacttctgcttcgtcagaagctgaacttggcatagacttt
ggtcaaatttatgtcggttctactttgcacgaggataacaaagagcttgtgaagagactt
ggtatgccagcttccggctcaaaagatttacacttccctacgcgatatgctcaaaatggc
tggggacaattcacaacctgcctctggaagcagcactggtcttactggagaagtccatcg
tacaacttgcaccgaacaacatatatgcttaatgcatcttttctgtttggattcctgttc
tggggtcaaggcaagaaattacatgatcagcagagtctactgactctacttggttcaaca
tattgctctataatcttttgtgggatacaaaattgtcagtcggtattgccatacattaac
agagaacgaactgtgttctacagagaggttttcgctggtatgtatgcttcgtgggcatat
tcagctgctcaggtcatcgtagagatcccatacgtcttcgttcaagtacttgtattcaca
gtgatcacatatcctatgattggataccagttttcagcatacaaggtctttgtatatttc
tactgcatgttttgtactctactctcctacacatatcttgggatgctgttgattgcaatc
actccgagctttccggtggcagccactctacagtcagccttctacacgacgttcaacttg
tttgctggcttctttattcctcgcccgcaaattcccaagtggtggatatggttatactat
gtggttccgacatcatggtcgttgaagggagttgttacgtctcaatacggagacgtggag
aaggagattgcagtattcggagagaggaagacggtggccggatttctcactcaatatttt
ggatttcagcataacatgctacccttggttattccagtcttgacttgttatcctattctc
tttgcttttctctttgcttattgcattaggaagtttaactaccaaagaaggtga
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integrated database retrieval system
