KEGG   Salvia hispanica (chia): 125188679
Entry
125188679         CDS       T09851                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
shis  Salvia hispanica (chia)
Pathway
shis03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125188679
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shis03019]
    125188679
   03041 Spliceosome [BR:shis03041]
    125188679
Messenger RNA biogenesis [BR:shis03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     125188679
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     125188679
Spliceosome [BR:shis03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    125188679
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Nup35_RRM_2 Nop14
Other DBs
NCBI-GeneID: 125188679
NCBI-ProteinID: XP_047941633
LinkDB
Position
5:complement(20862880..20866324)
AA seq 437 aa
MAKKRKTPSSLHTNEHKQAVVREEAKVLEKEEEEEESSNEEEIGESSSSEEELESESEDG
EEEESSSAEEEEEGEDEASKQEALRELLEPFGKSQIIDLLKEAAVKDPKLLPKIVQKADS
DPAHRKIFVFGLGWDATAEQLVQAFKSFGEIEESKLITDKNTGRAKGYAFVMFKTRAAAK
KALKVPQKRIGNRTVTCQLAAIGASSGTVVAEGGNNRKMYVANVAPHVSFEKLKAFFGRF
GEIEEGPLGVDPVTNKFKGFAIITYKSTEGYKKAMEEPIKVVENCQLHCKKFVENFANNS
SGQTSNSSVNPAATDVNYSNLGMNTGMLGANLNAGGFLMAQNPGIGLAGNALLAAGYDQA
GLAASIFGASLSGNYGINSISPTVMGRYGAQEAYNGLGMYQNSQTGLSSIGTMGTTTTAT
AVTKVPTSGGSASTTFP
NT seq 1314 nt   +upstreamnt  +downstreamnt
atggcgaagaaacgaaaaactccatcgtctctgcatacgaatgaacataaacaggcagta
gttcgtgaagaagcaaaagtcttagaaaaagaagaagaagaagaagagtcctctaatgag
gaagaaatcggagagtcttcctcatcagaagaggagttggaatcagaatccgaggatgga
gaagaagaagaatcttcttcagctgaagaagaagaagaaggagaggatgaggcatcaaag
caagaagctctccgggaattattggaaccttttggaaaatcccaaatcatagaccttctc
aaagaagcggcagtgaaggaccctaaactcctccctaaaattgtgcagaaggcagattct
gaccccgcccaccgcaaaatatttgtttttgggctcggttgggatgccaccgccgaacag
ctcgtccaggcattcaagtcctttggtgaaatcgaagagagcaagttaatcaccgataag
aacactgggcgtgctaaaggatacgccttcgtgatgttcaagacgcgagccgcagcaaag
aaggctctcaaagttccccagaagaggatcgggaacaggaccgtcacgtgccagctggca
gcgattggtgcctcttctggaacagtggtagccgagggaggaaataataggaaaatgtat
gtggcaaatgtagcgccccatgtaagcttcgagaagctcaaagcgttttttgggaggttt
ggagagatcgaggaaggaccattaggggtggatcctgttacaaataagttcaaaggattc
gccattataacttacaagtcaacggaaggttacaagaaagcgatggaggagccaattaag
gtggttgagaattgtcaattgcattgcaagaaatttgttgagaattttgccaacaattcg
tctgggcagactagtaacagtagtgtgaaccctgcggctactgatgttaactacagtaat
ttggggatgaacacaggtatgttgggagcaaatttgaatgcgggcgggtttttgatggcg
cagaatccagggattggattggcagggaatgctttattagcagcagggtatgatcaagca
ggtttagctgcttcaatatttggtgcatcattgagtggtaactatgggatcaatagcata
agtcctacagtgatgggccgctacggggcgcaagaagcttacaatggattaggaatgtac
cagaattcgcagacagggttatcatctataggcacaatgggaacaacaaccacagctacc
gcagtaacaaaggttcctacaagtggtggatcagcatcaacaacgtttccatag

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