Salvia hispanica (chia): 125188727
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Entry
125188727 CDS
T09851
Name
(RefSeq) phospholipase A-2-activating protein isoform X1
KO
K14018
phospholipase A-2-activating protein
Organism
shis
Salvia hispanica (chia)
Pathway
shis04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125188727
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GFIT
Motif
Pfam:
PUL
PFU
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
EIF3I
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
BBS2_Mid
Beta-prop_DCAF12
Beta-prop_IFT122_1st
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
125188727
NCBI-ProteinID:
XP_047941703
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Position
5:complement(8834657..8846604)
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AA seq
765 aa
AA seq
DB search
MASNSMDIDFKEYQLRCQLRGHEDDARGICICGNAGIATSSRDRTVRFWTLDESQKRDYT
MSKILLGHTSFVGPLAWIPPNEDFPEGGIMSGGMDTLLLVWNLMTGEKVHTLKGHKLQVT
GIALDGSDVVSSSVDCTLRRWRGSQQVEEWEAHKAAIQAVIKLPSGELVTGSSDMTLKLW
KGKSCIHTFQGHTDTVRGVAIMPNLGILSASHDGTIRLWALSGELLMEMVGHTSIVYSVD
AHASGLIVSASEDCSAKIWKDGICVQSIEHPGCVWDAKFLENGDIVTACSDGIVRIWTVD
HERTADTVELDSFASQISQYKLSRKRVGGLKLEELPGLDSLKTPGSSDGQTKVVREGDNG
VAYAWNMREQKWDKIGEVVDGPDDNMKSSVLNGVQYDHVFDVDIGDGEPIRKLPYNRSEN
PYDVADKWLLNENLPLSYRQQIVEFILQNTGQKNFTPDPLFRDPYTGSNAYVPGAPSKFP
DASSSKPSYKHIPKRGMLAFDTAQFDGILKKISEFNSSLLSDPEKKHLSLSDSDVSRFNA
IVKILKDTSHYHSSRFADVDVALMLKVLKTWPVALLFPVIDVVRMIVLHPDGAAKLMQHV
KDQDDIVIEVIKKVTASPPLPANLLTCLRAVTNLFKNTCYHEWLLNHRAEVLDALSCCCS
SSNKNVQLSYATLILNYAVLLIEKKDEEGQSQVLSAALEMAEGETIDSDSRFRAMVAIGS
LMLEGLVRRVALDFDVLTIAKTAKSSKEAKIAEIGADIELVAKQS
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaattctatggatattgatttcaaggagtatcaactgaggtgccaacttcga
ggccacgaggatgatgctcgaggtatatgcatatgcgggaatgctggcatagcaacttct
tcaagagacagaacagttagattctggacattggatgaatcacaaaagcgcgattataca
atgtcaaagatattattgggccatactagttttgtgggtccattggcttggattcctcca
aatgaagattttccagagggaggaattatgtctggtgggatggacactttgcttctcgtc
tggaacctgatgacgggagagaaagtgcatacgctgaagggtcataaattgcaagtcact
ggcattgcattggatggttcagatgtcgtgtcatcatccgtggactgtacattgagacgg
tggagaggaagtcaacaagttgaggagtgggaagctcacaaggcagcaattcaagcagtt
attaagttgccctctggcgagcttgttacaggttccagtgacatgactttgaagctttgg
aaagggaagtcttgtatccatacttttcaaggacatacagatactgttcgaggagtggct
attatgccaaacttaggaattctttccgcatctcatgatggtacaatcaggctatgggcc
cttagtggggagcttctaatggagatggttggtcatacatccattgtttattctgtagat
gctcatgcatctggccttatagtcagtgctagcgaggattgttcagcaaagatatggaaa
gatggaatttgtgtgcagagcatagagcatcctggttgcgtctgggatgctaaattcttg
gaaaatggtgatattgtgactgcttgctctgatggcatcgtgcgcatctggaccgtagat
catgaaaggactgctgacactgtagagcttgactcatttgcttctcaaatttctcaatac
aaactcagcaggaaaagagttggaggcctgaaattggaagagttaccaggtctagattca
ttaaagactccaggaagtagtgatggacagacaaaggtagttcgagaaggagataatggt
gtggcctatgcttggaatatgagagaacagaagtgggataagattggtgaagtagttgat
ggacctgatgataatatgaagtcctctgtgctcaatggcgttcagtatgaccatgtattc
gatgttgacattggagacggtgaacctatacgaaaacttccctacaatcgttcagaaaat
ccatatgatgtcgctgataagtggttactcaatgaaaatttgccactttcttaccggcaa
cagattgtagaatttattctgcaaaacacaggacaaaagaattttactccagatccatta
tttcgagacccttatactggatccaatgcttatgtacctggagcaccatcaaaattccca
gatgcatcatcatcaaagccttcttacaagcacattccaaaaagagggatgcttgcattc
gacacagctcagtttgatggaatcctaaagaagatttctgagtttaacagttccctgctg
tctgacccggaaaagaaacatttatcattgagtgacagtgatgtgtcaagatttaatgcc
attgttaagatcttgaaagacacgtcacactaccatagcagtagatttgcagatgttgac
gtggcattgatgttgaaagttctgaaaacatggccagttgctttactttttccagttatt
gatgtagtaaggatgattgtgttgcacccggatggagcagcgaagcttatgcagcacgtc
aaggatcaagacgatatagtcattgaggtgataaagaaggtgactgcgagtcctccgctt
cctgcaaatctgcttacctgcctccgtgcagttactaatcttttcaaaaacacatgctat
catgaatggttattaaatcatcgtgctgaggttcttgatgcactatcatgctgttgttca
tcttcaaataagaatgtccagttgtcctacgcaactttgatcctcaattatgctgttctt
ttgattgagaagaaggatgaggaaggtcaatctcaagttctttcggcagcactagagatg
gctgaaggggaaacaattgattctgattccagatttcgggctatggtggcaattggctca
ctgatgcttgaaggcctagtgagaagggttgctttggattttgacgtgctaacaattgcc
aaaacagcaaagtcgtctaaggaagccaagattgctgaaattggagctgatatcgaactg
gttgcaaaacagagctga
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