Salvia hispanica (chia): 125188755
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Entry
125188755 CDS
T09851
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
shis
Salvia hispanica (chia)
Pathway
shis03015
mRNA surveillance pathway
shis04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125188755
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125188755
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
shis01009
]
125188755
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125188755
03036 Chromosome and associated proteins [BR:
shis03036
]
125188755
Protein phosphatases and associated proteins [BR:
shis01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
125188755
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
125188755
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
125188755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_8
EF-hand_1
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
125188755
NCBI-ProteinID:
XP_047941756
LinkDB
All DBs
Position
5:30857815..30869180
Genome browser
AA seq
532 aa
AA seq
DB search
MDLDFNGDITCLDAELLQIQDVSPLAIKTNPYVAEKLFDQWLSLPETNSLVKSLLNNKGG
GPLNASGTASTNTAASNTLPSMFPSGSTPPLSPRSSGSPRIIKRAGPSALGLKSVNEPVK
ELIPQFYFQNGRPPPNEMKERCLFRINQFFYGHVDGLQIHEFKPVTKEICKLPSFFSSVL
FKKIDTEGAGIVTRDAFVDYWINRMLTKDLATQLFTILKQPENRHLVQDDFKPVLRELLT
THPGLEFLQGTPEFQERYAETVIYRIFYYVNRAGNSRLTLKELRRSNLIAAMQHADEEED
INKVLRYFSYEHFYVIYCKFWELDSDHDFLIDKENLIRYGNHALTYRIVDRIFSQVPRKF
TSKVEGKMGYEDFVYFILSEEDKSSDLSLEYWFKCIDLDGNEIITRNEMQFFYEEQLHRM
ECMAQEPVLFEDILCQIVDMVHPEDESYFTLRDIKGSRLSGSVFNILFNLNKFMAFESRD
PFLIRQERENPNLTEWDRFAHREYIRLSMEEDAEDASNGSDNNWDEPLEAPF
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggatttggattttaatggagatatcacgtgcctcgatgctgaactattgcaaattcag
gatgtgtcgccgttggcaattaaaaccaatccctatgttgccgaaaagctctttgatcag
tggctttcgcttcctgaaacaaattccttggtaaaatcgttgcttaataataagggaggt
ggcccattgaatgcttctggaacagcaagcacaaatactgcagctagcaatacattgcct
tctatgtttccttcaggtagtacaccaccactctcaccaaggagttcaggctctcctcga
atcatcaagagggcaggtccttctgccttaggcttgaaatcggtgaatgagcctgtgaaa
gagcttatacctcagttttacttccaaaatggccggccaccacctaatgaaatgaaagag
cggtgcttgtttagaatcaaccaatttttttatggtcatgtggatggactgcaaatacat
gaatttaaaccagtgacgaaggaaatttgcaagctcccgtctttcttttcttctgtactg
tttaaaaagattgatactgagggtgctggaattgtgaccagagatgcatttgttgattat
tggattaatagaatgttaaccaaggatctggcaacacagttatttacaatcttgaagcag
ccagagaacaggcacttggtccaggatgactttaaacctgttcttcgagaacttttaacc
actcatcctgggttggaattcctacagggtacgcctgaatttcaagaaagatatgctgaa
actgtaatatacagaatattttactatgtgaatagagcgggtaatagtcgtcttacacta
aaagagctgagacgctcaaacttgattgccgcaatgcagcatgcagatgaagaagaggat
atcaataaagtcttgaggtacttctcatatgagcatttttatgtgatatactgcaagttc
tgggaactggactcggatcatgattttttgatcgacaaagaaaacctcatcagatatggt
aaccatgcacttacctacaggattgttgatagaatattttcccaggttccgagaaagttc
accagtaaggttgaaggaaagatgggatatgaagatttcgtctacttcatattgtcagag
gaggataaatcatctgaccttagtcttgagtattggttcaagtgcatagatttggatggt
aatgaaattataacgaggaatgaaatgcaattcttttacgaggagcagttgcatagaatg
gaatgcatggcccaagagcctgtgcttttcgaagatatattgtgtcaaattgtggacatg
gttcatccagaggatgagagctattttacactgcgagatataaaaggaagcagactttct
ggcagtgttttcaatatcctgtttaaccttaataagtttatggctttcgagtctcgtgat
ccttttctaattcggcaggagcgcgagaaccctaatttgactgagtgggatcgatttgct
caccgggaatacattaggctctcaatggaggaagatgcagaagatgcctctaatggaagt
gataataattgggatgaaccactcgaggctcctttttga
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