Salvia hispanica (chia): 125188768
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Entry
125188768 CDS
T09851
Name
(RefSeq) oligouridylate-binding protein 1B-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125188768
03041 Spliceosome [BR:
shis03041
]
125188768
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
125188768
Spliceosome [BR:
shis03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125188768
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
125188768
NCBI-ProteinID:
XP_047941774
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Position
5:28568123..28573160
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AA seq
422 aa
AA seq
DB search
MQNQRLKQQQHQALMQQALLQQQSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGN
IHTQVTEPLLQEVFASTGPVESCKLVRKEKSSYGFIHYFDRRCASLAILTLNGRHLFGQP
IKVNWAYASGQREDTSSHYNIFVGDLSPEVTDAMLYACFSVYPSCSDARVMWDQKTGRSR
GFGFVSFRNQHEAQSAINDLTGKWLGSRQIRCNWATKGAGTTDEKQNSDAKSVVELTNDS
SEEVKEAASTDAPENNPQYTTVYVGNLAPEVSQVDLHRHFHALGAGSIEEVRVQRDKGFG
FVRYSTHAEAAMAIQLGNAQSYLYGKQIKCSWGNKPTPPGTSSNPLLPPGPAPLHGLSAA
DLLAYERQIAISKMGGIPALMPHQGQHALKPATMGMGAGASQAIYDGGYQNVAGAQQLMY
YQ
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatcagagattgaagcagcaacagcatcaggcgttgatgcaacaagcgcttctt
cagcagcagtcgctctatcatccaggcctcttagctgctcctcagattgagccaattcct
agtggaaatctgcctcctgggtttgacccaagcacatgccgcagtgtgtatgttggtaac
attcacacgcaggtgacagaaccacttcttcaagaagtttttgcaagtactggtccggtt
gagagctgtaagcttgttagaaaggaaaagtcatcctacggattcattcattactttgat
cgtagatgtgcttctcttgcaatattgactctcaacggaaggcacttgtttgggcagcct
ataaaagttaactgggcatatgctagtggtcagagggaagacacatcaagtcattataac
atttttgttggtgatctcagccctgaggttactgacgccatgttgtatgcatgcttttct
gtttatcctagctgttctgatgcaagggttatgtgggaccaaaagactggccgttctagg
ggatttggattcgtctctttccgcaaccaacatgaagctcaaagtgcaataaatgattta
actggaaaatggcttggtagcaggcagatacgttgtaactgggccacaaagggtgctggt
accactgatgaaaagcagaactcagatgctaaaagtgtcgtggaactaacaaacgattcg
tctgaagaagttaaggaggcagcaagcactgatgctcctgagaataaccctcaatacacc
actgtatatgttggtaatcttgctccagaagtaagccaggttgacctccaccgccacttc
catgcacttggtgcgggatcaattgaagaagttagggtgcagcgtgataaaggatttggc
tttgtgaggtacagcacccatgcagaggctgctatggccattcaattgggaaatgctcag
tcatatctctatggcaaacaaattaagtgttcgtggggtaacaaaccaactccacctgga
actagctcaaacccactccttccacctggacctgcaccactgcacggcctatctgctgct
gaccttttagcgtatgagcggcaaattgcaatcagcaagatgggcggcatccctgccctc
atgcctcaccagggtcaacacgctctgaagccagcaactatgggaatgggtgcaggcgct
agtcaagccatctatgatggtggttatcagaatgtagctggcgcccagcagcttatgtac
taccagtaa
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