Salvia hispanica (chia): 125188815
Help
Entry
125188815 CDS
T09851
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b-like
KO
K11088
small nuclear ribonucleoprotein D3
Organism
shis
Salvia hispanica (chia)
Pathway
shis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125188815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125188815
03041 Spliceosome [BR:
shis03041
]
125188815
03032 DNA replication proteins [BR:
shis03032
]
125188815
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
125188815
Spliceosome [BR:
shis03041
]
Complex A
U1 snRNP components
Sm proteins
125188815
U2 snRNP components
125188815
Complex B
U1 snRNP components
125188815
U4/U6.U5 tri-snRNP components
125188815
Complex C
U2 snRNP components
125188815
DNA replication proteins [BR:
shis03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
125188815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
125188815
NCBI-ProteinID:
XP_047941829
LinkDB
All DBs
Position
5:complement(11597586..11602580)
Genome browser
AA seq
132 aa
AA seq
DB search
MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQL
EHVFIRGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSLGVGRGRAVAMRARAQAAGRGA
PPGRGSAPPVRR
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgaagcttagggattccggtgaagctgctgcacgaggcgtctgggcatgtggtg
acggtggagctgaagagcggagagctctaccgtgggagtatgatcgagtgcgaggacaac
tggaattgccagctcgaaaacatcacttacactgccaaggatgggaaggtctcacaactc
gagcatgttttcattagaggcagcaaagtcaggttcatggtcatcccagatatgcttaag
aatgctcccatgttcaagcgtttggaagctagaattaagggcaagggttcatctcttgga
gtaggacgtgggcgtgctgttgcaatgcgagccagagctcaggctgctggtcgaggagcg
cctcccggtagaggctctgcaccaccagtacgtagatga
DBGET
integrated database retrieval system
