Salvia hispanica (chia): 125188816
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Entry
125188816 CDS
T09851
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
shis
Salvia hispanica (chia)
Pathway
shis03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125188816
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
shis01009
]
125188816
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125188816
03036 Chromosome and associated proteins [BR:
shis03036
]
125188816
Protein phosphatases and associated proteins [BR:
shis01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
125188816
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
125188816
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
125188816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
Htt_N-HEAT_1
Vac14_Fab1_bd
HEAT_EZ
HEAT_EF3_N
PDS5
Adaptin_N
CLASP_N
Cnd1
TAF6_C
CEP104-like_TOG
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
125188816
NCBI-ProteinID:
XP_047941831
LinkDB
All DBs
Position
5:complement(4309748..4315750)
Genome browser
AA seq
587 aa
AA seq
DB search
MSMVDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGEEHANVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRES
DLVDSFIPLAKRLAAGEWFTARVSACGIFHIAYPSAPDTLKTELRSIYSQLCQDDMPMVR
RAAATNLGKFAATVEAAHLKTDIMSMFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILDPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVYSIREAAANNLKRLAEEFGPEWAMQHIVPQV
LDMVTNPHYLYRMTVLQAISLLAPVMGSDITCSKLLPVIVNATKDRVPNIKFNVAKVLQS
MIPIVDQSVVEKTIRPSLVELSEDPDVDVRFFANQALQSIDHVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggtggatgaaccattgtacccaatagcagtcctgatagatgagttaaagaat
gaggacattcagctacggttgaactccatacgtagactatccaccattgcacgtgcgctc
ggggaggagaggactagaaaggagttgattccgtttttgagtgagaacaatgatgacgat
gatgaggtgctgcttgctatggctgaagaattgggcgtcttcattccatatgttggagga
gaggaacatgctaacgtgctgctcccccctttagaaacactttgcactgtggaggagacc
tgtgtgagggacaaagctgtagaatcgttatgcagaattggatcacaaatgagggagagt
gatttggttgactcgtttattcctcttgcaaagagactggcagcaggcgagtggtttaca
gcccgtgtctcagcttgtggcatatttcatattgcatatccaagtgccccggatacacta
aagacagaattaaggtcaatatacagccaattatgtcaagatgatatgcctatggtgaga
agagcggctgcaacaaacttgggaaagtttgctgctacagtggaagctgctcatctcaag
acagatataatgtctatgtttgaggacctcacacaagatgatcaagattctgttcgctta
ctggctgttgagggctgcgctgctcttggaaagttgttggagcctcaggattgtgttgcc
catattctgcctgtgattgtcaacttctcacaggataagtcttggcgtgttcgttacatg
gttgccaatcaattatatgagctttgtgaggctgtggggcctgaacctactaggacggat
ttagttcctgcatatgtgcgtctgcttcgagataacgaagcagaagtgcgaatagcagct
gctggaaaagttacaaaattctgtcggattcttgatccagaacttgctatccagcatatt
ctgccctgtgtgaaggaattgtcatctgattcttcccaacatgtaagatctgctttggca
tctgtcattatggggatggctcctgtcttgggaaaggatgcaacaatcgaacaacttctt
cccatatttctctccctcttgaaagatgaattccctgatgttcgcctcaatatcattagc
aagttagaccaagtcaaccaggttataggaatcgatcttctctcccagtccttactacca
gccattgtcgagctggcagaagacagacattggagagtcaggcttgccatcatagaatat
atacctcttttggctagtcagttgggtgttggatttttcgacgacaagctcggtgccctt
tgcatgcagtggctgcaggacaaggtttactcgatccgagaagctgctgctaataatttg
aagcgtctggcggaggaattcggtccagaatgggcaatgcagcatatcgttcctcaggtc
ttggatatggtgacgaacccacactacttgtaccgtatgactgtgcttcaagcaatctcg
ctacttgctccggtcatgggttccgacataacttgctccaaattattgcccgtcattgtc
aacgctaccaaggacagggtgcccaacatcaaattcaacgtggccaaggtgttgcagtcg
atgatccccatcgttgatcaatctgtggtggagaagactattcgtcccagtttggtcgag
ctctcggaggaccctgacgttgatgtccgtttttttgcgaatcaagcgctccagtcaatc
gatcatgtcatgatgtctagctag
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