Salvia hispanica (chia): 125188949
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Entry
125188949 CDS
T09851
Name
(RefSeq) ruvB-like protein 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125188949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shis03036
]
125188949
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
shis03037
]
125188949
Enzymes [BR:
shis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
125188949
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
125188949
Chromatin remodeling factors
SRCAP complex
125188949
INO80 complex
125188949
INO80 complex (yeast)
125188949
SWR1 complex
125188949
ASTRA complex
125188949
Cilium and associated proteins [BR:
shis03037
]
Motile cilia and associated proteins
Dynein assembly factors
125188949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
AAA_19
AAA_18
Mg_chelatase
bpMoxR
AAA_25
DnaB_C
TsaE
AAA_28
AAA_7
AAA_11
nSTAND3
NPHP3_N
Zeta_toxin
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
125188949
NCBI-ProteinID:
XP_047942026
LinkDB
All DBs
Position
5:complement(23686362..23690417)
Genome browser
AA seq
455 aa
AA seq
DB search
MKIEQVQSTTKKQRIATHTHIKGLGLQPDGKALPLAAGFVGQDSAREAGGLVVDMIRQKK
MAGRALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAI
GLRIKENKEVYEGEVTELSPEETESVTGGYGKSISHVIIGLKTVKGTKQLKLDPTIYDAL
IKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQDVTL
HDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAELVPGVLF
IDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICSVRGTDMTSPHGIPVDLLDRLAII
RTETYGPAEMIQILAIRAQVEELQIDEESLAYLGEIGQQSSLRHAVQLLSPSSIVAKMNG
RDIICKADLEEVNSLYLDAKSSAKLLQEQQDRYIS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagaacaagtgcaatcaaccacaaagaaacagagaatcgcaactcacactcac
attaaaggccttggcctccagcccgatggaaaagcattgcctttggctgctgggtttgtg
ggtcaggattccgcaagggaagctggtggccttgtggttgatatgattcgacagaagaag
atggctggccgtgctctcttactagctggtcctcctggcactggaaagactgcgcttgct
cttggaatttcccaagaacttggtagcaaggttccattttgcccgatggttggatcagag
gtatattcatcagaagtaaagaagacagaggttctaatggaaaactttcggcgggctatt
ggtctccgcattaaagaaaacaaggaagtttacgaaggagaggttaccgaactatctcca
gaagaaactgaaagtgtgactggtggttatggtaaaagtatcagccatgttataattgga
ttgaagactgtaaaaggaaccaaacaattgaagttggatccgacaatatatgatgccttg
attaaggaaaaggtagctgttggtgatgtgatatacattgaagcaaatagtggagctgtt
aaaagggttggaaggagtgatgcttttgctactgagttcgatctcgaggcagaagaatat
gtgccactccctaaaggagaagttcataaaaagaaggagatagtgcaggatgttacattg
cacgatcttgatgctgcaaatgcacggccccaaggaggccaagatatattgtctctgatg
ggtcagatgatgaaacctaggaaaactgaaatcactgacaagctgcggcaagaaataaac
aaggttgtcaaccggtatatagatgaaggtgttgcagagcttgttcctggtgtcttgttt
attgatgaggttcatatgctggatatggagtgcttttcttatttaaatcgtgctttagaa
agttcgctatctcccattgtgatctttgccacaaatcgaggaatttgcagtgtcagagga
acagacatgactagtcctcatggtataccagttgacttgttggatcggttggctatcata
agaaccgaaacctatggccccgccgagatgatacagatattagctatccgagcacaagtt
gaggaactccaaatagatgaggaaagccttgcttatcttggagagattggacagcaatca
tcattgagacatgccgtccagttgctatctccttccagcattgttgctaagatgaatggg
cgtgatattatttgcaaggcggatcttgaagaagtgaattctctctacctggatgccaag
tcttctgcaaagcttcttcaagagcagcaggaccgatacatctcgtga
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