Salvia hispanica (chia): 125188985 Help Entry 125188985         CDS       T09851                                  Name (RefSeq) vacuolar sorting protein 18   KO K20181   vacuolar protein sorting-associated protein 18 Organism shis  Salvia hispanica (chia) Pathway shis04148   Efferocytosis Brite KEGG Orthology (KO) [BR:shis00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     125188985  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:shis04131]     125188985 Membrane trafficking [BR:shis04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     125188985    Hops complex     125188985 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pep3_Vps18 Clathrin zf_RING_Vps8 zf-RING_11 zf_RING_Vps8_fungal zf-RING_UBOX zf-RING_Vps41 zf-C3HC4 zf-rbx1 Phage_int_SAM_1 zf-ANAPC11 zf-RING_2 Motif Other DBs NCBI-GeneID:  125188985 NCBI-ProteinID:  XP_047942080 LinkDB All DBs Position 5:complement(22082379..22092980) Genome browser AA seq 985 aa AA seqDB search MESSRQVFSVDLLERYAAKGRGVITCMAAGNDVIVLGTSKGWVIRHDFGVGDSFDIDLSV GRPGEQSIHRVFVDPGGSHCIATVVGGGTSDTFYTHAKWAKPRILTRLKGLLVNAVAWNR QHITEAYTKEIILGTENGQLYEVSVEEKDKKEKYIKFLFELNEVTEEFTGLQMETTGTNN GIRYYVMAVTPTRLYSFTGIGSLESVFVSYAERSVHFMELPGEIPNSELHFFIKQRRAIH FAWLSGAGIYHGGLNFAALHSLPNGDQNFVENKALLDYSKCSEGVMVKPSSMAVSEYHFL LLIGNKVKVVNRINQQIVEELYFDQTSDAVSRGVLALCSDASAGLFYAYDQNSIFQVSVS DEGRDMWKVYLDLKEYAAALANCRDALQRDQVYLVQAEEAFIGKDFLRAASFYAKINFAL SFEEITLKFISIGEQDAVRTFLLRKLDNFSKDDKCQITMISTWVTELYLDKINRLLLEDD AISEHSSSEYQSIITEFRAFLSDCKDVLDEATTMKLLESYGRVDELVFFASLKEQHEIVV HHYIQLGEAKKALRVLQKPNVQAELQYKFAPDLIMLDAYETVESWMTKKDLNPRKLIPAM MRYSSEPHAKNETHEVIKYLEYCVHRLQNEDPGIHNLLLSLYAKQDDESSLLRFLQCKFG KGQLNGPEFFYDPKYALRLCLKEKRMRACVHIYSMMSMHEEAVALALQVDPELAMAEADK VEDDEDLRKKLWLMVAKHVIEQEKGTKRENIRKAIAFLKETDGLLKIEDILPFFPDFALI DDFKEAICSSLEDYNEQIEKLKDEMNDATHGADNIRNDISALAQRYAVVKKDEACGVCGR KILNAADDYRMARTYTSVGSMAPFYVFPCGHSFHVNCLIAHVTKCSSESQAEYILDLQKQ LTLLGNEPSKEMNGGLTEEEPIASMTPGDKIRSQLDDAIASECPYCGDLMIREISLHFLE EKDESEAWDITPQNLSSQKSISLIA NT seq 2958 nt NT seq  +upstreamnt  +downstreamnt atggagtcgtcgcggcaggtattctcggtcgacctactggagaggtatgccgccaagggg cggggagtgattacatgtatggccgccggaaacgacgtcattgtgcttggaaccagcaag ggctgggtcatccgccacgatttcggcgtcggggattcatttgatattgatctctctgtt ggaagacctggtgagcagtcaatccatagggtttttgttgatcctggaggtagccattgt attgctactgtagttggcggtgggacttcagatacattttacacacatgcaaagtgggca aagcctcgtattttgactagattaaagggccttttggtgaatgctgttgcctggaatagg cagcatattactgaagcttacacgaaagaaatcattctcggtactgaaaatggacaactt tatgaagtttctgttgaggagaaagacaagaaggaaaagtacatcaaatttttgtttgaa ctcaatgaagttactgaagaatttacaggattgcagatggaaacaacaggcacaaataat ggaattagatattatgtgatggctgttactccaactcggctttattctttcacgggaata ggttcattggaatctgtttttgttagctacgcagagcgttcagttcatttcatggaactt cctggtgaaatcccaaacagtgagctgcattttttcattaagcagagaagagcaatacat tttgcatggctgtctggagctggaatctatcatggtggcctgaattttgcagcacttcat agtttaccaaatggggatcaaaactttgtggagaacaaggctctcttggattattctaaa tgtagtgaaggtgtgatggttaaacctagctccatggcagtgtcagaatatcatttcctt cttctaattggaaacaaggttaaggttgttaataggatcaaccaacagatcgttgaggag ctttattttgatcaaacatctgatgcagtttcaagaggtgttctagctttatgcagtgac gcatcggccgggcttttctatgcatacgatcagaattccatctttcaggtatctgtcagt gacgaaggtcgagacatgtggaaagtgtatctagacttaaaggaatatgctgcagccttg gcaaattgtcgtgatgctctccagagagatcaagtatatctggtgcaggcagaagaagct tttattggaaaggattttctcagggctgcttccttttacgccaagatcaactttgcattg tcatttgaagagatcactttaaagttcattagcataggcgagcaggatgctgtaaggaca tttttattgcggaagcttgataatttttcaaaggatgataaatgccagataaccatgatt tcaacctgggtgactgaattgtacttggataagattaatcgactacttttggaagatgat gccatatctgagcattcaagttcagaatatcaatcaattatcactgaatttcgagctttt ttgagtgactgcaaggatgtattggatgaggctactaccatgaaacttctagaaagctat ggtagagttgatgaattggtattctttgctagtctaaaagagcagcatgagattgtggtt catcattatattcagctaggtgaggctaagaaagcactgcgagttcttcagaaacctaac gttcaggcagagcttcagtacaaatttgcgccggaccttattatgcttgacgcatatgaa actgttgaatcatggatgaccaagaaagacctgaatccaaggaagctcattcctgcaatg atgcgatattcaagtgaacctcatgctaagaatgaaacccatgaagtgataaaatacttg gagtactgtgttcatcgtttgcagaatgaggatcctggcattcacaatttattgttgtct ttgtatgctaagcaggatgacgaaagcagtcttttgcgcttcctccaatgcaagtttggg aaggggcagctaaatggtcccgagttcttctatgatccaaaatatgccctgcgtctttgt cttaaggaaaaacgaatgcgtgcctgtgttcacatatacagtatgatgtctatgcacgaa gaagcagttgcccttgctctacaggttgatccggagcttgccatggctgaggctgataag gttgaagatgatgaagatctgaggaagaaactttggcttatggttgctaagcatgtcatt gaacaagaaaaaggaacgaagagagagaacatacgaaaggctatagcatttctgaaggaa actgatggacttcttaaaatagaagatatcttaccttttttcccagattttgctttgata gatgatttcaaggaagctatctgctcatcgctggaggattacaatgagcaaattgaaaaa cttaaagacgagatgaatgatgctacacatggagcagacaacataagaaatgatattagt gcccttgcacaacgatatgctgtcgtgaagaaggacgaagcatgtggggtttgtgggaga aaaatattaaatgcagctgatgattaccgaatggctaggacctacacttcagttggatcg atggctcctttctatgtatttccatgtgggcattcctttcacgttaactgcttgattgcc catgtgactaaatgctctagtgaatctcaagccgagtacatattggatttgcaaaagcag ctgactttacttggtaacgaacctagtaaggaaatgaatggaggtttaacagaagaagag ccaatagcaagcatgactcctggagataagatccggtcacagttggacgatgccatagca agtgaatgcccatattgtggtgatttgatgatccgcgagatatctttgcatttcttagag gaaaaggacgagagtgaagcatgggacattacgccacagaacctttcatcacagaagagc atctctttaattgcgtga

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