Salvia hispanica (chia): 125189004
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Entry
125189004 CDS
T09851
Name
(RefSeq) asparagine--tRNA ligase, chloroplastic/mitochondrial
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125189004
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shis01007
]
125189004
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shis03016
]
125189004
Enzymes [BR:
shis01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
125189004
Amino acid related enzymes [BR:
shis01007
]
Aminoacyl-tRNA synthetase
Class II (A)
125189004
Transfer RNA biogenesis [BR:
shis03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125189004
Prokaryotic type
125189004
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GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-GeneID:
125189004
NCBI-ProteinID:
XP_047942125
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Position
5:complement(35048761..35058229)
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AA seq
561 aa
AA seq
DB search
MAAAATTLRLLKPLSSAAAPLLAPLNNHAINRSVAPLLLFSSAALSRRHRSFCTAVSASV
SSGEATKAEPIESEKGAKIREFRRKLKIVDIKGGVDEGLDRLGETLVVRGWVRTLRAQSS
VTFIEVNDGSCLSNMQCVMSSDADGYDQVESGVISTGASVWIQGTVVASQGSKQKVELKV
DKLVTVGMSDPSFPIQKKRVSKEFLRTKAHLRPRTNTFGAVARVRNALAYATHKFFKENG
FLWLSSPIITASDCEGAGEQFCVTTLFSNPSEAVHSPVNAIPTKQDGSVDWSKDFFGKPA
FLTVSGQLNAETYATALTDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLEDDMACA
TAYLQYVVKYVLENCKEDMDFFNTWIEKGIIDRLSDVVEKKVVQLTYTDAVELLLKAKKK
FEFPVTWGCDLQSEHERYITEQTFGGCPVIVRDYPKDIKAFYMRQNDDGRTVAAMDMLVP
RIGELIGGSQREERLSYLEQRLDDLKLNKESYWWYLDLRRYGSVPHAGFGLGFERLVQFA
TGVDNIRDAIPFPRAPGSADF
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcggccaccactctccgcctcctcaaacccttatcttccgccgccgcccct
ctattggctcctctaaacaatcacgcaatcaaccgttcggttgctccattgcttctattc
tcctccgccgcgctctcccgccgccaccgcagcttctgcaccgcggtctccgccagcgtc
tcctctggcgaggctaccaaggccgagccaatcgagtcggaaaaaggcgcgaaaatccgc
gaattccgcaggaagctcaaaattgtggacattaaaggaggagttgatgaggggctggat
cgattgggggagactcttgtagtcaggggatgggttagaacgcttagggctcagagcagc
gtcacatttatcgaggttaatgacggttcttgtctttcaaacatgcaatgcgtgatgagt
tctgatgccgatggttatgatcaggtggagagtggtgtgatttctactggtgcttcagtg
tggatacaaggaaccgtagtagccagtcaagggtcgaagcagaaagtagaattgaaggtg
gacaaacttgttacggttggtatgagtgatccttctttcccaatacagaagaaaagggtc
agcaaagagttcttaagaactaaagcccatctgcgtccacgtaccaatacttttggggcg
gttgcaagggtgcgcaatgctttggcctatgccacacacaagttttttaaagaaaatggc
tttctttggctttccagcccaatcataactgcttcagattgtgaaggagctggtgaacag
ttttgtgtaacaaccttgttttcaaaccccagtgaagctgtgcattctccagttaatgcc
atccccacaaaacaggatggttcagtcgattggtccaaggacttctttggaaaaccagct
tttctaacagtatctgggcaactgaatgctgaaacatatgctactgctcttacggatgta
tatacttttggtcctacatttagagcagaaaattcaaatacatctcggcacttggctgaa
ttttggatgatagaaccagaacttgcatttgctgatctagaagatgacatggcttgtgca
actgcatatctccagtatgtagtaaaatacgttcttgaaaactgcaaagaagatatggat
ttcttcaatacttggattgagaaaggaatcatcgaccggctaagtgatgtagttgagaaa
aaggttgtccagctgacatacactgatgcagttgaacttctcctgaaagcaaagaagaaa
tttgaatttccggtaacgtggggatgtgatctgcaaagtgagcatgaacgatatataact
gagcaaacttttggtggatgtcctgtaattgtaagagattatccgaaggatatcaaggca
ttttacatgcgccaaaatgatgatgggcggactgttgcagccatggatatgttggttcct
cggattggcgaactaattggtggaagccaaagagaagaacgcctttcttatctggaacaa
aggttggatgatttaaagctcaacaaggagagctactggtggtaccttgacctgcggcgc
tatggttcagttccccatgccggattcgggttgggtttcgagaggcttgtgcagtttgct
actggggtcgacaatataagagatgcaatacccttccctcgagcacctggatcagctgat
ttttga
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