Salvia hispanica (chia): 125189031
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Entry
125189031 CDS
T09851
Name
(RefSeq) RNA-binding protein BRN1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shis03041
]
125189031
Spliceosome [BR:
shis03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125189031
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
BRAP2
GHMP_kinases_C
NOP5NT
Motif
Other DBs
NCBI-GeneID:
125189031
NCBI-ProteinID:
XP_047942155
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All DBs
Position
5:23009193..23015112
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AA seq
425 aa
AA seq
DB search
MAEEESVKLFVGQVPKHMTESQLLAMFQEFALVDEVNIIKDKATRASRGCCFVICPSREE
ADKAISECHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSDAEVSALFSNYGT
IKDLQLLRGYQQTSKGCAFLKFETKEQALAAIEALNGKHKIEGSTVPLVVKWADTEKERQ
ARRAQKALSLASNVSNSDSRQHLYGALPMGYMSPYNGYGYQTPGTYGLMHYRLPPMQNQH
AYHNLIPPLNQGNAIRGVTPDLSSGMPPRNFSVSPNYVGSAYPTVHGVQYPLTYHGGMIS
NRPLGGPSGSLSPSTANSQSAASSSVSTSSGGQNEGPPGANLFIYHIPQEFGDDELASAF
QRFGRVLSAKVFVDKATGVSKCFGFVSYDSPVAAQNAINMMNGFQLGGKKLKVQLKRDNK
QNKPY
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaggagagcgtgaagttgttcgtaggtcaagtgccgaagcacatgacggaa
tcgcagctgctcgcaatgttccaggagttcgccttggtggacgaagtcaacattatcaag
gacaaggctacgcgcgcttctcggggatgttgttttgtgatatgtccgtcgagagaggaa
gcggacaaggcgattagcgagtgccataataagaagacgctgcctggggcatctagtcca
ttgcaagtgaagtacgctgatggagagttggaaaggctagagcacaaactctttatcggc
atgcttccgaaaaatgtttctgatgctgaagtctctgcactattttcaaattatgggacc
ataaaagacttgcaacttcttagaggttatcagcaaaccagcaaaggttgtgcttttcta
aagtttgagacaaaagagcaagcgctcgcagctattgaagccctcaatggaaagcataag
attgagggttcaactgttccattggtggttaagtgggctgatacagaaaaggaaagacag
gcaaggagggctcagaaagctctatcattggcatctaatgtgtcaaattcagactccagg
caacatttgtatggtgctttaccaatgggttatatgtctccatacaatggatatggttat
cagactcctggaacttatggcctcatgcactatcgcctgccgccaatgcagaatcagcat
gcgtaccacaatcttatcccaccattaaaccaaggaaatgctatacgtggagtaacacct
gatctttcatcgggaatgcctccgagaaatttctccgtatcacctaattatgtgggatct
gcttatcccactgtacatggggttcagtatcccttaacttatcatggaggaatgattagt
aaccgcccacttggtggtccatctggttctctatcaccatctactgcaaatagtcaatct
gcagcatcttcaagtgtcagcactagctcaggcgggcagaatgaaggtccacctggagct
aatttgtttatttaccacattcctcaagaatttggcgatgatgagcttgcgagcgccttt
cagcgttttggtagggtattgagtgccaaagtttttgtcgacaaagcaacaggcgttagc
aaatgttttggattcgttagttacgattctccagttgcggcacagaatgccattaacatg
atgaatggctttcagttaggtggtaagaaattgaaagttcaacttaagagagataataag
caaaacaagccttactaa
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