Salvia hispanica (chia): 125189051
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Entry
125189051 CDS
T09851
Name
(RefSeq) transcription initiation factor IIB-2-like
KO
K03124
transcription initiation factor TFIIB
Organism
shis
Salvia hispanica (chia)
Pathway
shis03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125189051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shis03021
]
125189051
Transcription machinery [BR:
shis03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
125189051
Prokaryotic type
Archaeal type
TFB
125189051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
RB_B
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
125189051
NCBI-ProteinID:
XP_047942178
LinkDB
All DBs
Position
5:11782904..11785864
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AA seq
313 aa
AA seq
DB search
MMSDTYCPDCKKNTEVVCDHAAGDTVCSECGLVLEARSIDETSEWRTFADDSGDHDPNRV
GGPVNPLLGDAALSTVISRATNGANVDMSLTRLQNRGGDPDRALVLAFKTISSMADRLSL
VTTIKDRASEIYKRLEDQKCTRGRNLEALVAGCIYIACRQESKPRTVKEICSIVAGATKK
EIGRAKEFIVKQLKVEMGTSMEMGTIHAGDYLRRFCSNLGMSNEEVKAVQETVQKAGNFD
IRRSPISIAAAIIFMITQLSESKKPLRDISLATTVAEGTIKNAYKDLYPHATKIIPEWYS
KERDLKNLSSPKS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgacacatattgtccggactgcaagaagaacacggaggtggtctgcgatcac
gctgcgggagacaccgtctgctcggagtgcggcctcgtgctggaagcccgctccatcgac
gagacgtctgagtggcggactttcgccgatgattccggcgaccacgatccgaatcgtgtc
ggaggacccgtgaacccgcttctaggagatgcggcgctctccacggtcatctcgcgggcg
actaatggggcgaatgtggatatgtctctcacccgcctgcagaatcggggcggggatccg
gaccgggctctggtcttggcgtttaagacgatttctagcatggccgataggttaagtctt
gtaacaaccattaaggatcgtgcaagtgaaatatataaaaggttggaagatcagaagtgt
acaaggggtagaaacttggaggccctagtggctggctgcatttatattgcttgtaggcag
gaaagcaagccacgcactgtaaaagaaatatgctcaattgttgctggagcgacaaagaaa
gaaattggccgggcaaaagaatttattgtgaaacagttgaaggttgagatgggcacatca
atggagatgggcacgattcatgcaggggattatctgaggcgtttttgttctaatctaggc
atgagtaatgaggaggtaaaagcagtacaggaaactgtgcagaaggcagggaactttgat
attaggaggagtccaatatctattgctgcagccataatttttatgataactcagctatct
gaatccaagaaacccctaagagatatctctcttgcgactaccgtggcagaaggtacgatc
aagaatgcgtacaaggatctctatccccatgccaccaagatcatacctgaatggtattca
aaggaaagggacctgaagaatctttcgagccctaagtcgtaa
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