Salvia hispanica (chia): 125189119
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Entry
125189119 CDS
T09851
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
shis
Salvia hispanica (chia)
Pathway
shis03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125189119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125189119
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125189119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
125189119
NCBI-ProteinID:
XP_047942295
LinkDB
All DBs
Position
5:33955473..33959021
Genome browser
AA seq
397 aa
AA seq
DB search
MDSFTDEAKLFIGGIGWETTEEHLRDHFSRYGEVAHAVVMRDRVTSQPRGFGFVVFSDPS
VIPSVLQQTHNIEGRTVEAKRAMSREQQQTLKTGSNSTGGNFVGSENLKSKKIFVGGLPS
TLKEDEFRGYFEDFGSVTDVVIMYDTNTGRPRGFGFISFTTEDSVDRVLQKTFHELKGKL
VEVKRALPKDAVTGVGSRGSSRGYGSNFSSNESYNSPIGNSRMLQQTQPTNGGYHPNQPA
SGGYQQTQPASGGYPPYSVYGGASYGYAGNNNPGYGAYGGYEVGGHGSANAGYSGPAGVY
GNLGSPNTDFLKNQWSSQQAGYGASGYGQTANYGASVPWSNASRSSASGYAQAGRPPSGA
SQFVNKGYNYNGYGDDASHAYAGGNAMHPDGSWKPES
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggactctttcaccgacgaggcgaagctcttcatcggcggcataggctgggagacgacg
gaggagcacctcagagaccatttcagccgctacggtgaggtcgctcacgccgtcgtcatg
cgcgatagagtcacctctcagccccgcggcttcggcttcgtcgtcttctccgatccctcc
gtcatcccctctgtcctccagcaaacgcataacatcgaaggccgcaccgttgaagctaag
agagcaatgtcaagagaacagcagcagactctgaaaaccggaagcaatagtactggagga
aattttgtagggtctgagaatctcaaaagtaagaagatatttgttggggggttgccttct
accttaaaagaagatgaatttaggggatattttgaagattttggtagtgtaactgatgta
gtgatcatgtatgatacaaatactggccggccacgtggttttggtttcatcagctttacc
acagaagattctgttgatagagttcttcaaaagacatttcatgagctgaaaggcaagctt
gttgaggtaaaacgcgcactccccaaagatgcagtcacaggtgttggttctcgtggaagc
tccagaggctacggctcaaacttttctagtaacgaatcatacaatagtcccattggaaac
agtagaatgttacagcaaacacaaccaacaaatggtggttatcacccaaatcaacctgca
agtggtggttatcaacagacacaaccagcaagtggtgggtatcctccttattcagtttac
ggaggtgctagctatggttatgcaggaaataacaatcctggctatggtgcttatggtggc
tatgaggtcggtggtcatggaagtgccaatgctggttattctggtccagcaggagtttat
gggaacctaggttcaccaaataccgatttcttgaaaaatcaatggagtagccaacaagct
ggttatggtgcctcgggatatggtcaaactgctaactatggggcttctgttccttggagc
aatgcatcgaggagtagtgccagtggttatgcacaggcaggaagacctccgagcggtgct
tctcagtttgttaataaagggtacaactataatggttatggggacgatgcatctcacgcc
tatgctggtgggaatgcaatgcatcctgatggtagttggaaacctgaaagttga
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