Salvia hispanica (chia): 125189169
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Entry
125189169 CDS
T09851
Name
(RefSeq) AMSH-like ubiquitin thioesterase 1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125189169
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shis01002
]
125189169
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125189169
04121 Ubiquitin system [BR:
shis04121
]
125189169
Enzymes [BR:
shis01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125189169
Peptidases and inhibitors [BR:
shis01002
]
Metallo peptidases
Family M67
125189169
Membrane trafficking [BR:
shis04131
]
Endosome - Lysosome transport
Others
Others
125189169
Ubiquitin system [BR:
shis04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
125189169
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
NSUN5_N
pre-PUA_NIP7
Motif
Other DBs
NCBI-GeneID:
125189169
NCBI-ProteinID:
XP_047942382
LinkDB
All DBs
Position
5:12775457..12782896
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AA seq
506 aa
AA seq
DB search
MITRSSSGGGFNIAAVTKKIDVDNRISLRYYHRIADNILKQADIFREEKNIIDLYVMLLR
FSSLVTETIPCHKEYRTSLQSSKLNLKRKLNAAMTELEELKPAVSEKLEELHYKQIYQLH
KQQKSQQSQTLEPSVEWPLVRRNVNDFSRKQPVTNQYGYQVPQAFSLSKPTREHLQRATL
SIPRAKEETLSKHSILGPNGLRGQWQGPTHYKVQYPSNLDFTPIQIPGVNSTQNSTEDGI
VMKEESSEQDKSSFESVVPPKTDNQQIEESISLISFEDESASQSEVIRQPSPPPVLAEVQ
DLIPASTPETPTESGLVNVSDDALVCSEDPLQLHIPTELMNSFMKLAKSNTNKNLETCGV
LAGSLKNRKFYITALIIPKQESTSDMCQTTNEEEIFEVQDKQSLFPLGWIHTHPTQSCFM
SSIDVHTHYSYQIMLPEAIAIVMAPRDTSRKHGIFRLTSGGMTTIRHCPRRGFHSHDPPS
DGSPIYRQCTDVYMNPDLKFDVIDLR
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgataactcgatcttcatctggaggtggattcaacatcgccgccgttaccaagaagatc
gatgtagacaatcgaatttctctacgctattaccacagaattgccgataatattctcaag
caggctgacatatttcgtgaagaaaagaatattattgacctctatgttatgctccttaga
ttttcaagtttggtgactgagacgataccttgccataaagagtatagaacatctctacag
agcagtaaactcaatctcaaaaggaaattgaatgctgcaatgactgagcttgaggaattg
aaaccagctgtttcagaaaaacttgaggagttgcactataaacaaatttatcaacttcat
aaacagcagaaatctcagcaaagtcaaactttggaaccctcagttgaatggcctcttgtt
agacgaaatgtgaatgattttagtagaaaacagcctgttactaatcaatatggatatcaa
gttccccaagcattctcacttagcaaaccaactagagaacatctccaaagagcaacattg
agcattccgcgtgcaaaggaggaaactctttcaaaacattctattttgggcccaaatggg
cttcgtgggcagtggcagggtccaactcactataaggttcagtatccaagtaatttagac
ttcactcctatacagatcccaggggttaatagcactcagaattctactgaggatgggatt
gtgatgaaagaggaaagctcagaacaagataaatcaagcttcgaatctgtagttccacca
aaaactgataaccaacagattgaagaatctatttccctcatatcttttgaagatgaaagt
gcttcacaaagtgaggtaattagacaaccttctcccccacctgttctagcagaggtacag
gatttgattccagcctcaacgccagagactccaacagaaagtgggttggtaaatgtttct
gatgatgctttagtatgttccgaggatcccctacagttgcacataccaactgaactgatg
aacagttttatgaagctagcaaagtcaaacaccaataagaacttagaaacatgtggtgtc
cttgcaggttccctcaaaaacaggaaattttacattactgctcttattattccaaagcaa
gaatcaacttcagatatgtgtcagaccacaaatgaggaggaaatatttgaagtgcaggac
aagcagtctctttttccccttggatggattcatacacatcctactcaatcttgtttcatg
tcatcaattgatgtacatacacactactcttatcagatcatgttgccagaagccattgcc
attgtcatggcaccaagagacacttcaaggaagcatggcattttccggttgacttcaggt
ggcatgaccaccatcaggcattgcccacggcggggtttccattcccacgatcctccgtcc
gatggtagcccgatatacagacaatgtacagatgtttatatgaatcctgatctgaaattt
gatgtcattgatctacgttga
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