Salvia hispanica (chia): 125189173
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Entry
125189173 CDS
T09851
Name
(RefSeq) nuclear pore complex protein NUP133
KO
K14300
nuclear pore complex protein Nup133
Organism
shis
Salvia hispanica (chia)
Pathway
shis03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125189173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125189173
03036 Chromosome and associated proteins [BR:
shis03036
]
125189173
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125189173
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125189173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
125189173
NCBI-ProteinID:
XP_047942384
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All DBs
Position
5:147651..153746
Genome browser
AA seq
1323 aa
AA seq
DB search
MFSPPAKKSGLSARKNVFDRRDEVSTPLADSRRPLLDNRPATGTPAPWTSRLSVLARIPP
AKRSDRGDETDSVQPVYVGEFPQEVRDAQVMSSQNHFPADTSISGGMDKATSFAWIVCGN
KLFIWNHLIASASRKCIILDLDSVTSENGEMGKGGSQNNNWLVCFVNWHCSKKIGSKGTQ
QPSPAGIVMCNKKTRTVVFWPDIYNANVVPPLSCVASSEFEATYLHQNGQSKLSKQWQND
KFGNNFGKLGSINSLIASAIPSATHSCIALACSSDGQIWRFLCTPTGIEPKQIEHGMSST
FSPGVDSSQLVTSKGYPRSLTWHTFNHSSDDTTRQFLLLTNHEIQCFTLKLSAEFNVSEL
WSHEIIGTDGDLGIQKDLAGQKKIWPLDMDIDADGKVITVLVAIFCKDRVTSSSYTEYSL
LTMQYKSGVDIAKPLGKVVLEKKAPIQVIVPKARVEDEEFLFSMRLKVGGKPAGSAIILS
GDGTATVSHYWRSSTKLYQFDLPHDAGKVLDASVFPSLDDSEDGAWVVLTEKAGVWAIPE
RAVILGGVEPPERSLSRKGSSNDQSLQDERRNFPVAGNIAPRRASSEVWDAGDRQRPGLT
GVSRRSPQDEESEGLLSQLFHEFLLSGHVDGVLDKLKNSRAFEREGGTNVFTRISKSIVD
TLAKHWTTTRGPEIALSLASAQLVEKQQKHQKFLQFLALSKCHEELCSRQRESMQIIMEH
GEKLAGMIQMRELQNTISHESTSGLGSSYSSDTHTSGALWDLIQLVGERARRNTVLLMDR
DNAEVFYSKVSDLEEVFHCLERQLEYIISEDMPAPVQFRRVCELSSACVMLFHAAFQYKS
EYHLWYPPPEGLTPWYSKTVVWNGLWSVASFMLQLLNETNRLDGSEKFDFYSNLELLSEV
LLESYSNAITAKAERKEDPRTLLEEYWTRRDALLDALYKQVKSFVEAKLKDSAEENKEQH
NDTLMTLSSKLLSIAKRHEAYRTVWSICCDLDDSELLQNLMHESMGPKGGFSCFVFKQLY
ESKKLSKLMRLGEEFPDELATFLKLHPDLLWLHEVFLHQFSSASETLHALSLSKDDSSVS
IMEGTEATGSRRQLSLASRKHFLNLAKISAMAARDVGYELKVRRIDADLNILQLQEKILT
LLPEEEKKSIGEKLLPPIDLIELCLRIQHPEPSLRAFDLFLWTSASFLRNNTNLLEDCWR
NAANQDNWGELYQRSITEGWSDERTIEVLKETVLFQASSKCYGPDAETFDGIGFNEVLPL
RLESPDDPDSKYANSSVEAVLMQHKDYPEAGKLMLFALMVGSEWDASNAPPSVMDYEGSS
PTE
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atgttctctcctccagcgaagaaatcaggcttaagtgctcgtaaaaatgtgtttgatcgg
agagacgaagtttccacgccgctcgccgatagccggaggccgttgctcgacaatcgccca
gccacgggcacccctgccccttggacctctcgcctttccgttctggccagaatcccacct
gcaaaaagaagtgacaggggagatgagacagacagtgtccagcctgtctatgttggggag
ttccctcaagaagtacgtgatgctcaagtcatgtcgtcacagaaccattttcctgctgat
acatccatctctggtggaatggacaaggctacatcttttgcttggatcgtctgtggaaac
aaactcttcatatggaatcacttaatagcttctgcttcaagaaaatgcatcatccttgac
cttgattctgtcacatcagaaaatggagagatgggaaaaggtggttctcagaataataat
tggctagtttgtttcgtcaactggcactgctcaaagaaaattggcagcaagggaactcaa
cagcccagtcctgctggaattgtaatgtgcaataagaagactcgcactgtagttttctgg
ccggatatatataatgctaatgtggttccaccactctcttgtgttgcttcttctgagttt
gaggcaacttatttacatcaaaatggacagtcgaagttaagcaaacagtggcagaatgac
aaatttggcaacaattttggaaagttgggttccatcaattccttgattgcttcagctatc
ccttctgccacccacagctgcatcgctctagcatgtagttctgatggtcaaatctggaga
ttcctatgcaccccaactggtatcgagcctaaacaaattgagcatgggatgtcaagtaca
ttttctcctggagttgatagtagtcaacttgtgactagtaagggataccctaggtcgttg
acttggcacacttttaatcattcatcagatgatactacaagacagttccttctacttact
aatcatgagatacaatgctttacattgaaactttcagcagagtttaatgtatcagagctt
tggtcacatgaaataattgggaccgatggtgatcttggtatccagaaggaccttgctggc
caaaagaaaatttggcctcttgatatggatattgatgccgatggcaaggtaatcactgtt
ctcgttgctatattctgcaaggatcgggtcaccagttcgagctacactgagtactctctt
ctgaccatgcaatataagtctggtgttgatattgcgaagccgctaggtaaagtagtattg
gagaaaaaagcacctatccaagtgattgtacctaaagcaagagtagaggatgaggaattt
ttgttctccatgagactaaaggtaggtggcaagccagctggttctgctattatactctca
ggcgatggtactgcaacagtctcccattattggaggagctcaaccaaactctatcagttt
gacctgcctcatgatgcaggaaaagttcttgatgcttcggtttttccttccttggatgac
agtgaagatggagcgtgggtagtgctcacagagaaagctggagtttgggcaatacctgag
agggcagttatacttggtggtgtcgaaccacctgaaagaagcctgtcacgtaaaggcagt
tccaacgaccaatctttacaggatgagagaagaaactttcctgttgctggtaatattgct
ccaagaagagctagttcagaagtttgggatgcaggtgacaggcaaaggccaggcttaaca
ggagtttcccgtcgaagcccacaagatgaggaatcagaaggtttactaagtcagcttttc
catgagtttctgttatctgggcacgttgatggtgtacttgacaaactgaaaaattcaagg
gcatttgaaagagagggtggaacgaatgtatttaccaggataagtaaatcaattgttgac
actctagctaaacattggacaacaactagaggccctgagattgctttatctcttgcttca
gcacagcttgttgagaagcaacaaaagcaccaaaagtttcttcagttccttgcattatcc
aagtgccatgaagaattgtgttccaggcaaagagaatctatgcagattatcatggaacat
ggagaaaagcttgctggcatgatccaaatgagagaactgcagaatactattagccatgag
agtacatctggacttgggtcctcttatagttcagatacccatacttctggagctctttgg
gatcttatccagttggttggtgagagagcccgtcgaaacacagttcttttgatggatagg
gacaacgctgaagttttctatagcaaggtttcagatcttgaagaggtatttcattgctta
gagaggcagctagagtatattatcagcgaggatatgccggcacctgttcaatttcgcaga
gtttgtgaactctcaagtgcttgtgtgatgttattccatgcagcctttcaatataagagt
gaatatcacttgtggtaccctcctcctgaagggttgacgccatggtactctaaaactgtt
gtatggaatgggctatggagtgttgcatcattcatgcttcagttgctcaatgaaacaaac
cgccttgatggttctgaaaagtttgatttctactcaaatcttgaactactttcagaagta
ttacttgagtcgtattccaatgctatcacagcaaaagctgaacgaaaggaagatcctagg
actctactggaagaatactggacacgcagagatgcccttcttgatgccctctacaagcaa
gtgaagagtttcgtggaagccaaactgaaggactcagctgaagaaaacaaagagcagcat
aatgatactctaatgacactttcttcaaagttattatcaattgcaaaaagacatgaggcc
tatcgaactgtgtggagtatatgctgtgaccttgatgattctgaactcctccaaaatcta
atgcatgaaagcatggggcctaagggtggtttcagctgctttgtcttcaaacaattatat
gaaagcaaaaaactttcaaagcttatgagacttggtgaggagtttccagatgagttagct
acatttctgaagcttcatcctgatcttctgtggcttcatgaagtgtttcttcatcaattt
tcctcagcttctgagactttacatgcattatctctttctaaggatgatagctcagtttcc
attatggagggtactgaagcaactggctcaaggcgtcaattaagtttggcaagtagaaag
cattttctgaatcttgcaaaaatatcggcaatggcagcaagagatgtaggctatgagctg
aaggtcaggcggattgatgcagatctaaacattctacagctacaggaaaagatattgacg
cttctacctgaagaagaaaagaaatcaattggagaaaaacttcttcctcctatagatctc
attgagttgtgtcttagaattcaacatccggagccgtcattgcgagcctttgatcttttc
ttatggaccagtgcctcatttcttagaaataatactaacctattagaagactgctggagg
aatgccgcaaatcaagacaattggggagaactctatcaaaggtccataactgagggatgg
agcgatgagaggacaattgaggtacttaaggaaaccgttctttttcaagcctccagcaag
tgttatggacctgatgcagaaacttttgatggaatcggatttaacgaagttctccctctg
aggctagaaagtcccgacgacccagattccaagtacgcgaattcatctgtcgaagctgtc
ctgatgcagcacaaggactatccagaagccggcaagctgatgctgttcgcattgatggtt
gggagcgagtgggatgcttctaacgctcccccgtctgtgatggactacgaaggatcttcc
ccaacagagtga
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