Salvia hispanica (chia): 125189242
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Entry
125189242 CDS
T09851
Name
(RefSeq) formin-like protein 20
KO
K28090
formin
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
shis04812
]
125189242
Cytoskeleton proteins [BR:
shis04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
125189242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FH2
PTEN_C2
Arch_fla_DE
Motif
Other DBs
NCBI-GeneID:
125189242
NCBI-ProteinID:
XP_047942495
LinkDB
All DBs
Position
5:3908108..3916663
Genome browser
AA seq
1575 aa
AA seq
DB search
MALFRRFFYRKPPDRLLEITERVYVFDCCFSTQVLDEDEYKSYMNGIVPQLQSHYPDGAF
MVFNFKEGDSRSLLSDLLAQYDMTVMDYPQQYERCPLLPMETINHFLRSSENWLSLEGQH
NILLMLCEKGGWPVLAFMLAGLLLYRKQYTGEQKTLEMVYKQAPKDLLSLLTPLNPQPSQ
LRYLQYISKRSSPLDWPSSDAPLALDCMILQALPRYENGQGCRPIVRVYGHDSSSRLSNI
TTKLLFSSSNMSKDIPYFQKEECDLVTIDIHCHVQGDVVLECTHLEDDLVSEKMIFRIMF
HTEFVRANVLMLTRNEIDVLWDTKDLISREFTAEVRFSDATSLLSIITTEAVNEADEDDS
ETEVATPEEFFEADEIFSSFVDAQDGKVDKSVVDEAWVDEGRHDIPLKDELEQHAFQECT
MDKASSIHGSPDPLSNLMQIGQAKQESRYVFSEVVTDAETLCKNDGKLNKFEEEDNKQIE
AVRLMMKSEKEGSNEKLGVDNNEHMGLSIAHMKQPVHRSRSDPDAVVTSKKSKKQDSPIA
RIAKPNAVTRWIPSNKGSYMNSMHVHYPRSRHNSAPELLALCKDSVSGGKKKPQSAPASH
TASPLFPDLSVAVAKTARAPTSPSKAQVIQEPNELSLVELHTKHTSSSSIYNSALEAPSS
QSLSEKPASPFTSITHDEELSLSLLPPPPPPPPPPLIALSISPSPPVPQSQPTTTPIHVP
PPPPPSKLTTIPPPVPPPPPPSQPTPIPTTSPPSQPISTPAPPPPPLPSTHTVTYSLPPP
APPAHASPPSFQNATFQVLSSSTTPGPSTPSPLFVDSNLAINLQGNLIPPQIPIPPTSSS
VENTSTVIPPPPPPPPPPWCTVVLVLANSSTPGQFPFTFHSAYPSLPPNQGVYYFPQSLS
QLTGAPQPTSIPPGLPGFPHPLALFGTPTQPFPSPSPASGATLIQPPPPANDPSPPIPPS
IVSKAAPPPPPPPPPPPPTSSAAETLPPSTSCAPPPPPPPPPTPPCATAPPPPPPPIGGA
PPPPPPPPFGGAPPPPPPPPGGAPPPPPPPPFGGAPPPPPPPPGGAPPPPPPPPGGAPPP
PPPPPGGGAPPSPPPPGGAPPPPPLPGGGPPPPPPPMGGGPRPPPPPGGGPPGPPPPPGA
PGGGGPPPPPGPRGGPPPPPGGGRGMGAGRGQARPVVKKSNLKPLHWSKVSRALKGSLWE
ELQKQGTPQVAPEFDASELETLFCATAPAKDKGKGGGKKVAEAKPTKIQLIDLKRAYNVE
IMLTKVKMPLPDMMAAALALDDTILDADQVENLIKFCPKKEEMELLKTYTGDPEMLGKCE
QFFLELMKAPRVETKLKVFLFKIQFNSQLSDFKKSLVIVHSACEEVRNSTKLREILQKIL
VLGNTLNEGTAKGAAVGYKLDSLLKLTDTRSTTCRMTLMHYLCKALGAKNPDLLDFYKDL
PNLEASTKIQLKSLADEMTSISKGLEKVKQEMDASEHDGPVSEIFHRTLKEFVGTAESEV
TAVMNTYSLAGKNAEAVATYFGEDPNRTPLEQVTATLSNFVKLFQTACDENIKQAEADKK
KAQKEAEAAENAAKN
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtttagaaggttcttctaccggaagccgccggatcgacttctggaaatcact
gagagggtctatgtgttcgattgctgcttctctactcaagtgcttgatgaggacgagtac
aagtcatacatgaatgggattgtacctcagctacaaagtcactaccctgatggcgctttc
atggttttcaatttcaaagaaggggacagtagaagcctattatctgatttgttagctcag
tatgatatgacagtcatggattatcctcagcagtatgaaaggtgtccactgttacccatg
gagacaataaatcactttttgcgatcaagtgagaactggttgtcgcttgaggggcaacat
aatattcttttaatgctttgtgaaaaaggaggatggcctgtgcttgcatttatgctagct
ggccttcttctttacaggaaacaatatactggtgagcagaagacacttgaaatggtatac
aaacaagcgcccaaggaccttctttcccttttgactcctttgaatccacagccgtctcag
ctcaggtatcttcagtacatcagtaaaagaagttctccgttggattggccatcatcagat
gcgcctttggctttggattgcatgatacttcaagcccttcctcgatatgaaaatggacaa
ggatgtcgaccgatagtacgagtatatggtcatgattcttcttccagattgtccaatata
actacaaagcttttgttttcatcttctaacatgtcaaaagatataccttactttcaaaag
gaagagtgtgatctagtaacaatagatatccattgccatgttcaaggagatgttgtcctt
gagtgcacccatttggaggatgatctagtgagcgagaaaatgatttttcgaattatgttc
catactgaatttgttcgagcaaatgttttgatgctgacacgtaacgaaatagatgttctt
tgggatacaaaggaccttatctcgagggaattcacagcagaggtacgcttctcagatgca
acttcactcctgtcaatcatcaccacagaagctgtgaacgaagctgacgaagatgacagt
gaaacagaagttgccactcctgaagaattttttgaggcagatgagatctttagcagtttc
gttgatgcgcaggatggtaaggttgataaatctgtggttgatgaagcttgggttgatgaa
ggtcgtcatgacattcccttgaaggatgaactggaacaacatgcatttcaagagtgtact
atggataaggccagcagcattcatggcagcccggatcctcttagtaacttgatgcagatt
gggcaagccaaacaagagtcgaggtatgtgttttccgaggttgtcaccgatgcagaaacc
ttgtgcaagaacgatggtaagctcaacaagtttgaagaagaggataataaacaaatagaa
gcagtgcgcttgatgatgaaaagtgaaaaggaaggttcaaatgagaaattaggtgttgat
aataatgagcacatgggcctttcaattgcccatatgaaacagccggtgcacagatcaaga
tctgatccagatgcagttgttaccagtaagaaaagtaagaagcaagattcaccgatagcc
agaatagctaagccaaatgctgtaacgaggtggataccttctaacaaaggttcttacatg
aattcaatgcatgtacattatcctcggtcaagacataacagtgctccagaattattagct
ctttgcaaggattctgtatctggagggaaaaaaaagccccaatctgctcctgcatcccac
actgcttctccattatttccggatttatcagtagccgtagccaaaacggctcgtgcccca
acttctccctctaaagcacaagtcatacaagagcccaatgaacttagtctagtagagctg
cacaccaaacatacttcttcatcttccatctacaattctgcattggaagcaccttcatca
caatcattatcagaaaaacctgcttcaccatttacatcaattactcatgacgaagaacta
agcttgtcgcttctgcctccacctccacccccacccccacctccacttatagctctgtct
atatctccatccccaccagtgccccagtctcaacccacgaccacacctattcatgtgcct
ccccctccccctccatccaagcttacaaccattcctccacctgtgcctccccctccgcct
ccatctcagcccactcccattcccacaacttcgcctccatctcagccaatttccaccccc
gcacccccgcctccgcctcttccatctactcacacagttacttattcattgccaccacca
gcgccacctgcacatgcatcacctccatcattccagaatgcaacttttcaagtattatct
tcgtctaccacccctgggccttcaactccctcaccattgtttgtggattctaacttagct
atcaatttgcaaggaaacctaattcctcctcaaatacccatacctcctacctcgtctagt
gtggagaataccagtacggttatcccaccaccccctccacctccaccacccccttggtgt
actgttgttctagtattagcaaattcttcaactccaggtcaatttccatttacttttcac
tctgcttatccgtcactacctcctaatcagggcgtttattatttccctcaatctctatct
caactgactggtgctccacaaccaacatcaatacctcccggtcttccaggatttccacat
ccccttgctttatttggaacacctactcaaccttttccgtctccttctcctgcaagtggt
gctacactaattcagcctccacctcccgctaatgatccttctccaccaatcccaccatct
attgtttctaaagcagcacctcctcctccaccaccacctcctcctccaccgccaacctct
tccgctgctgaaacattacctccttcaacatcatgtgctccaccacccccaccgccgccc
ccaccgactcctccttgtgctactgcacctcccccaccccctccacctattggaggagca
ccacctcccccgccccctccaccttttggaggagcgccccctccaccaccacctccgcct
ggaggagcaccacctccaccaccacctccaccttttggaggagcaccacctccacctcca
cctcctcctggaggagcaccacctccacctccacctcctcctggaggagcaccacctcca
ccaccacctccgcctggaggaggagcaccaccatcaccccctccgcccggaggagctccg
cctccaccacctcttcctgggggtggccctcctcctccccctccaccaatgggaggaggc
ccacgtccaccacctcctcctggtggtggtccacccggcccaccaccgccaccaggtgca
ccaggaggaggaggtccaccaccgccaccaggtccacgaggaggtccaccgcccccacct
ggaggaggtagaggaatgggtgctggtagagggcaggcacgccccgtagtgaaaaaatcc
aatttaaagccacttcactggagcaaggtgagccgggcactaaaaggaagcttgtgggaa
gaattacaaaaacaaggaacccctcaagttgcaccagaatttgatgcgtccgaacttgag
actcttttctgtgcaacagccccggcaaaagataaaggcaaaggtgggggcaagaaggtt
gctgaagctaagcctaccaaaatccagctgattgacctaaagagggcctataatgttgaa
atcatgcttacaaaagtgaaaatgccacttcctgacatgatggccgcggcacttgctctg
gatgacacaattctggatgctgatcaagtagaaaatctaataaaattttgtccaaaaaag
gaggagatggagcttctcaagacgtacacaggtgatccagagatgttgggaaagtgtgaa
cagtttttcctagagctgatgaaggcaccacgagtggagactaaattgaaggttttcctt
ttcaagattcaattcaactctcagctttctgatttcaaaaaaagcttggttattgtacac
tctgcctgtgaagaggtccgtaactccaccaaattgagagaaatcttgcagaaaatatta
gttcttggaaatacattgaatgagggaactgctaaaggtgctgctgtcggatacaaactg
gatagtcttttgaaactgacggatacacggtcaaccacttgcaggatgacacttatgcat
tatctttgtaaggcacttggcgcgaagaatccagatcttctagacttttacaaagatctt
cctaacctggaagcttccaccaagattcaactaaagtcattggcagatgaaatgacatct
atctccaagggtttagagaaggtgaagcaggaaatggatgcttcggaacatgatggtcct
gtctccgaaatttttcacaggacgttgaaggaatttgttggtactgctgaaagtgaagtg
actgctgtaatgaatacatattctcttgcgggtaaaaatgctgaagcagtggctacatac
tttggtgaagatcctaaccgaacccctctcgagcaagttactgcaaccctctcaaacttc
gtgaagctattccaaacagcctgcgatgaaaacatcaagcaggctgaagcagacaagaag
aaggctcaaaaggaggctgaagctgcagagaacgcggccaagaattaa
DBGET
integrated database retrieval system