Salvia hispanica (chia): 125189291
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Entry
125189291 CDS
T09851
Name
(RefSeq) eukaryotic translation initiation factor-like
KO
K03260
translation initiation factor 4G
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125189291
03012 Translation factors [BR:
shis03012
]
125189291
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125189291
mRNA cycle factors
Stress granule specific factors
125189291
Translation factors [BR:
shis03012
]
Eukaryotic type
Initiation factors
eIF-4
125189291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
Motif
Other DBs
NCBI-GeneID:
125189291
NCBI-ProteinID:
XP_047942540
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All DBs
Position
5:5868489..5873793
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AA seq
704 aa
AA seq
DB search
MTSITVVTTIPEKILKVKQEVEAEFGTDISWSHGESNVSDQLQSRFSELDNRDWRNRSTQ
LPAPAEERSWESVRDRDLGGRWQQDANQYNKQDQTNSQYARSQLSSNQGAVQTLIKADAP
WSARRGNLSEEERVLKTVKGILNKLTPEKFDLLKGQLIDSGITTADILKGVISLIFDKAV
LEPTFCPMYALLCSDLNAKLPPFPSDVPGGKEITFKRILLNICQEAFEGADKLREEVKQM
TAPEQESEKRDKERLIKLRTLGNIRLIGELLKQKMVPERIVHHIVQELLGQDSSSCPEEE
NVEAICQFFNTIGKQLDENQKSKRINDTYFSRLKELGAHPQLAARLRFMIRNVLDTRANN
WVPRREEVKAKTITEIHTEAEKNMGLRPGATAGMRNSRVMAGGQGGLSPTGFPMNRPGTG
GMMPGMPGVRKMPGMPGMDNDNWEVPRSRNMPRGDGSMAQPPARAQPQLPGKTPSVNPRF
LPQGTGGFMGSKTSALMQGTGVPARTPTVEPVSEAPAPVRQAPVAVKPLPPTAKLSLDEF
KRKTKSLMEEYFSIRLLDEALECVLELKSPAYHSEFVKEAISLALEKAPPCVEPVSKLMG
YLFEKKVVNADDIGTGCLSYAALLEDLAIDLPKAPANFGEIIGKLVLAGALDFKVVKEIV
AKVGDDYFQKAVFAAVKNTVSNDSAGKQLLDAEASEVAACESLF
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgacttctataacggtggtaaccaccatcccagagaaaattttgaaagttaaacaagaa
gttgaagctgagtttggtacagatatcagctggagtcatggagaaagcaatgtttcagat
cagctccagagccgcttctctgagctggacaaccgtgactggcgtaatcgttctacacag
ttgcctgctcctgctgaggagagatcctgggagtcagtaagagacagggaccttggtgga
aggtggcaacaagatgctaaccagtacaataagcaagatcaaactaactcacagtatgcc
agatcacagttatcttcaaaccaaggggctgtacagactctaatcaaggctgatgcacca
tggtctgctcgaaggggtaatctatctgaggaggagcgtgttctgaaaacagtgaagggg
atattgaacaagctgactcctgagaaatttgatcttctgaagggtcaattaatagactct
gggataacaacagctgatattttaaagggcgttatctccttgatatttgacaaggctgtg
ttggagccgacattttgccccatgtatgcattgctctgttcggacctcaatgcaaagctt
cctccattcccatcagatgtgcccggtggcaaagagattacatttaagcgaattctcttg
aacatctgccaagaagcatttgaaggtgccgacaaattgagggaagaggtcaaacaaatg
actgctcctgagcaagaatctgagaaaagggacaaggagaggttaatcaaacttcgtacg
cttggaaatatccgcttaattggagaacttctgaaacagaagatggttcccgagaggatt
gttcatcacatagttcaggaactcctgggacaggacagttcaagttgtccagaagaggag
aatgttgaggccatatgtcagttcttcaacacaattgggaaacagcttgatgagaaccaa
aaatcaaagcgtatcaatgatacatatttcagtcgcttgaaggagttgggagcacaccct
cagctggctgcacgacttaggtttatgatacgcaatgttctagatacacgtgcaaacaac
tgggtaccaagacgtgaagaggtaaaagccaaaacaattactgagattcacacggaagct
gagaagaatatggggttacgcccaggtgctactgctggcatgagaaacagcagagtaatg
gctgggggtcaagggggtctctctcctactggctttccaatgaaccggcctggtacaggt
ggtatgatgccagggatgcccggagtaaggaaaatgccagggatgccgggaatggataat
gacaattgggaggttcctagatctcgaaatatgccgaggggtgatggttcaatggctcag
cctcctgctcgtgctcagcctcaactgccagggaagacaccttcggttaacccacgattc
ctacctcaaggtaccggtggtttcatgggtagcaaaactagtgctctcatgcagggtacg
ggtgttcctgctcgaactcctactgttgaacctgtatctgaagcacctgcgccagttaga
caagctccagttgctgtcaagccattgcctccaactgcaaaattgagtcttgacgagttc
aagagaaagacgaaatcgctgatggaggaatactttagtatcagacttctcgatgaagca
ttggaatgtgttctagaactgaagtccccagcttatcattctgaatttgtcaaagaagct
atatcactcgcattggagaaagcacccccatgcgtcgaaccagtttctaaactcatgggc
tacttgtttgaaaagaaggttgttaatgctgatgacattggaacagggtgtctcagctac
gcagcgctactggaagatcttgccattgatttaccaaaagctccggctaattttggtgag
attattgggaaacttgtgttggcaggggcacttgacttcaaggtcgtgaaggagatcgtg
gcaaaggtgggcgatgactacttccaaaaggccgtctttgctgctgttaagaacactgtg
agtaacgactcggctgggaagcagttgctggatgcggaggcgtctgaggttgccgcctgt
gagagcctgttctag
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