Salvia hispanica (chia): 125189301
Help
Entry
125189301 CDS
T09851
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 2-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shis03021
]
125189301
Transcription machinery [BR:
shis03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125189301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
WASH_WAHD
SlyX
Motif
Other DBs
NCBI-GeneID:
125189301
NCBI-ProteinID:
XP_047942549
LinkDB
All DBs
Position
5:6396845..6407652
Genome browser
AA seq
603 aa
AA seq
DB search
MVLLSPTYFHTLSLRRPIFNQTTDPRALIVEGFLSLHRLKVFFFWIELACWKSFKRFSWK
YKALRQLGLQFYGNNPVGHRPVQQTQTTSRIYPLIAIKSSLSRWCISHRKKAKQVVETWE
KLFKAAPNEQRVSFLYLSNDILQNSRRKGSEFVNEFWKVLPTALKIVYESSNENCRKVAF
RLVDIWEERKVFGSRGQNLKNELLGKNPSPVNNEKIVVPNPIKVVKRDATSVRIKIAVGG
LPEKILTALQLVHDEAVNEKGALDKFQKAISSVQEIEKDILYTSSQGNLNGSDVVDNLER
QENVVKQCIDELEKSEAVRADLISQLREALQDQETKLEQVRSQISVARSQIEQTANIRLQ
LASNSSMPPPGNQVVIEPSFSTAISATNVTVPPPTNPLTSFVNPTVEESKKAAAAAVAAK
LAASTSSAQMLTSILSSLVAEEAASMSSGLKRQKLETPMSFSDGKNSEGANSTYFPTSQQ
AMTSMPPVQSSTAQSGSQVNQLQVPFLPPPPPPPPLAPPGNSPSNQMGQSNMMGLPYGYG
ANNLLPPPLSNAPTGFARPNPPQQTQQQPQSQQQPASGGYYRPPGIGFYGQSHQPPTPPI
HRQ
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggtgcttttaagccccacttattttcacacactctctctccgtcgccctattttcaat
cagacaacggaccctcgggctctcattgttgagggttttctctctcttcatcgtctcaaa
gtgttttttttctggattgagctcgcttgctggaagagtttcaaacgattctcttggaaa
tacaaggcattaaggcaacttggactacagttttatgggaataatccagtcgggcaccgg
cctgttcaacaaacacaaacaacttcaagaatttatccactcatagctatcaaatcttct
ttgtcccggtggtgcatttctcatcgtaaaaaggctaagcaagttgttgaaacatgggag
aagttatttaaagcagcgccaaatgaacaacgtgtttcctttttatacttgtccaatgac
atcctgcaaaatagcaggcgcaagggcagtgaatttgtcaatgagttctggaaggttctt
ccaacagctcttaagattgtttatgaaagtagcaatgaaaattgcaggaaagttgccttc
agactggttgacatctgggaagaaagaaaggtttttggatctaggggacaaaatttgaaa
aatgaattgctggggaagaatccttctcctgtcaacaatgagaagattgtagttcctaat
cctattaaggtggtgaagagagatgcaacatctgtcagaattaaaatagctgtgggaggt
ttgccagaaaaaattttaaccgcgttgcagttagtacatgatgaagctgtcaacgaaaaa
ggagcgttagacaaatttcaaaaagcgatttcttctgtacaagaaatcgagaaagatatt
ctatatacttcttctcaaggaaacctcaatggttctgatgttgttgataatttagagaga
caggagaatgttgttaaacaatgcattgatgaacttgaaaagtctgaagcagttagagct
gaccttatttctcagcttagagaagcacttcaggatcaagaaacaaagctggagcaggtt
cgaagtcagatatctgttgctcgcagccaaattgagcaaacagctaatatcagactccag
ctagcatcaaactcctccatgccacctccgggaaaccaagtggtgatcgaaccctctttt
tctactgccatttcagcaaccaacgttacggtgcctcctcctaccaatccattgacttca
tttgtgaaccccaccgtggaggagagcaagaaggctgcagctgcagcagttgctgcgaaa
ctagctgcttcaacatcttctgcccagatgctcacatctattctctcatctctcgtagca
gaagaggctgcatcaatgagcagtggcttgaaacggcagaagctggagacaccaatgtca
ttttctgatgggaagaattccgaaggagcgaattcgacctattttccgacttcacagcag
gcaatgaccagtatgccacccgttcagtccagcactgcacagagtggttctcaggtgaac
caactgcaggttccgtttcttccacctcctccacctccgccaccacttgcacctccgggt
aattccccttcaaatcaaatgggccagtctaatatgatggggctgccatacggttacggt
gcaaacaacctactccctccaccgctctcaaatgcaccaacagggtttgctaggccgaac
cctcctcagcaaacacagcagcagccacaatcacagcagcagccagcaagtggtggatac
tacaggccccctggtatcggattctatgggcaaagccaccagccaccgacacctcccata
catcgacaatga
DBGET
integrated database retrieval system
