Salvia hispanica (chia): 125189467
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Entry
125189467 CDS
T09851
Name
(RefSeq) protein CHROMATIN REMODELING 20-like
KO
K10779
transcriptional regulator ATRX
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shis03000
]
125189467
03036 Chromosome and associated proteins [BR:
shis03036
]
125189467
Transcription factors [BR:
shis03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
125189467
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
125189467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
Helicase_C_2
DUF7792
Motif
Other DBs
NCBI-GeneID:
125189467
NCBI-ProteinID:
XP_047942701
LinkDB
All DBs
Position
1:complement(20185950..20192188)
Genome browser
AA seq
1252 aa
AA seq
DB search
MESGSSDDEYQENEAISESYEDEQSISQACLELENLVAELVEIEKRSAEAQEVLEEEPLV
EVEADVREELARSLTGDQLEKAVCEEMSLYKEEWELKLDELEKESAYLLEQLDGAGIDLS
SLYKWIEKEVPNSCRTEAWRGRTHWLGTEISEEATRSVKKAEEYLTIHRPARRFDLSTRW
QGASGFLGKKIGNLDGSVSGDGSLNKDWEAFNILCSETASSKHWAAVYLASTPLQAAELG
LESAGVDEVEEIGDVDGASRDPFVADAIANERDLSLTLNQMRNFKKIKEEDDVKDDLKLR
RKETRRKKRSRKVCFQGELSSIDEESRMDVFMIHDNGSTEDVVEYLHDSSDERDGVVVCS
SSESGSDNEANVKRKRDMRKSDVVVISSSDSDSDADANDNSSVKRRKKIRRILDDDELGE
ETQKKIAIEKERQERLRSLEVTEFVTVGEGVGAGHEAQDNATSGHIINLVREEGEEAVRI
PPSISKKLKPHQLLGIRFMWENSIQSAGKVRSGDKGLGCILAHMMGLGKTFQVVAFLYTA
MRCTDLGLKTALVLTPVSVLHNWQHEFSKWRPSELRPLRIFMLKDAPREKRLELLTKWRT
EGGVFLIGYSAFRNLSSGKYAKDPNMGREISHALQVGPDILVCDEAHTIKNTKAETTKAL
KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSCTEFRNRFQNPIENGQHSDATSE
DVKIMNQRSYILYEQLKGFVHRMGASIVKNDLCPKTVFVIEVKLSTLQRKLYRGFLDFHG
FTKGKEASGNMKSFFAGYQALAQILNHPGILQLRKENKGHSKFESVEGSGDENIECNMVS
KEKVDNPHKKRSNDYDDEDWWSGLLPEKTLNELDCSGKMVLLLDILTMCSDIGDKALVFS
QSLSTLDLIEQYLSRLPQPGETGRCWTKGEDWYRLDGKMESSERQKLVDRFNEARNERVK
CVLISTRAGSLGINLYAANRVIIIDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLIAKGTL
EEKIYKRQVNKEGLAARVVDKQQVHRNISRGEMVDFFYFADDESAVVSCDLEHERAVDNP
DTAGSMRDMLKQRRPPSLGASSDKVMQSLLSKHQPRWIVSHHEHEALLQENEDEKLSKEE
QDSAWEVYKKTPELVAVPRVSPNDCSTDQYKVSVDKFALQSSAVVSAAVESKPAVLMVET
AENDPVARDTSRGGKCTKVMHQLTLRSQGTKIGCSTICEECGQEVSWELLGV
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggagagtggttcttccgacgatgaatatcaagaaaacgaagccatttctgagtcttat
gaagacgaacaatcaatttcgcaggcatgtttagagttggaaaatctcgtggccgagctt
gtggaaatcgagaaaagatctgctgaggcgcaagaggtgctggaagaggagcctctggtc
gaagtagaagcagatgttagggaagaattagcccggtctctcactggtgatcaattggag
aaggctgtttgtgaggagatgtcattgtacaaagaggagtgggaattgaagctcgatgag
ctcgagaaagagagtgcttatctactggagcagcttgatggtgctggaattgacctttcc
agtttgtacaagtggatcgagaaggaagttcctaacagctgccggactgaagcatggaga
gggaggactcactggcttgggactgagatatccgaggaagctacaagatcagtcaaaaag
gcggaggagtatctcacgatccaccggcctgcaagaaggtttgatctctcaaccagatgg
caaggcgcaagtggcttcctcgggaagaaaattggaaaccttgatggtagtgtaagtgga
gacggaagcttgaacaaagattgggaagcttttaacatattgtgctcagaaacggcgtct
agcaagcactgggctgctgtctaccttgccagcacccctctgcaggctgctgaactcggc
ctagaatctgctggagttgatgaggtggaggagattggtgatgttgatggcgcttcaaga
gatccattcgttgcagacgctatagcaaacgaaagggatctcagtcttactcttaaccaa
atgaggaactttaaaaagattaaagaggaggatgatgttaaggatgatctcaagcttcgt
aggaaagaaacgaggcgtaaaaagcgaagcagaaaggtctgctttcaaggagagctttcc
tcgatagacgaggagagccgtatggatgtcttcatgattcatgacaatggctctactgag
gatgtggttgaatacctgcacgattcgtctgatgagagggatggagtagttgtatgctct
agttctgaatctggttcagacaacgaagccaatgtcaaaaggaagcgggatatgagaaaa
tcggatgttgttgttatctcaagttctgattctgattcagatgcggatgccaacgacaac
tccagtgttaagagaaggaaaaagattcggagaatcctcgatgacgatgagctgggggag
gagacgcagaagaaaatcgcaattgaaaaggaacgtcaagagcgccttcgatctttggag
gttactgaattcgtgacggttggagaaggcgttggagctggacacgaagcccaggacaat
gccacctcgggccacataataaacttggtaagggaggaaggcgaagaggccgtgaggatt
cctccgagcatctcaaagaaactaaaaccccatcagcttttagggatccgattcatgtgg
gaaaatagcattcaatcggcggggaaggtgagatcgggagacaaaggtcttggttgcatt
ctagcacatatgatggggttaggaaagacgtttcaggttgttgcgtttctctacacggct
atgagatgcactgatcttgggctaaaaacagcactcgtcttgactcccgtgagcgtttta
cataactggcaacacgagttctcaaagtggagaccatccgagctgaggcctcttcgtatt
ttcatgcttaaagatgctccaagggagaaaaggctcgagttgctaacgaagtggagaacc
gagggtggggtattcttgatcggctactctgctttccgtaatctatcgtccgggaagtat
gctaaggatccgaacatggggagggaaatcagccacgcgcttcaggttggaccggacatc
ctcgtgtgtgacgaggctcacacgatcaagaacaccaaggccgaaacgaccaaggccctc
aagcaagtcaaatgccagagacggattgcactgaccgggtcgcctcttcagaacaatttg
atggagtactattgcatggtcgattttgttcgagaaggctttcttggctcctgcaccgag
tttaggaaccgcttccaaaatcccatcgagaacggccagcacagcgatgctacctcggag
gatgtcaagataatgaaccaaagatcgtatattctgtacgaacagttgaagggattcgtg
catcgcatgggagccagcattgtcaaaaacgacttatgccccaaaaccgtttttgtcatt
gaggtgaagctatccactctacagaggaagctgtatcgagggttcctcgactttcatggc
ttcacaaagggcaaggaggcgtctggcaacatgaaatctttcttcgcgggctaccaagcc
ttagctcagatattgaaccatcccggcattctgcaactgaggaaagaaaacaaaggccac
agcaaattcgaaagcgtagagggctcgggtgatgagaatatcgaatgcaacatggtgtcg
aaagaaaaggtcgataatcctcacaagaaacgtagcaacgattatgatgatgaagactgg
tggagtggtcttttgcctgaaaagactctaaatgagcttgattgcagtggcaaaatggtg
ttgctacttgatattctcacaatgtgctcggatataggcgataaggcgctcgtctttagc
caaagtttgtcgactttggacctaatcgaacaatatctttcgagattgcctcaacctgga
gagaccggaagatgttggacgaagggggaggactggtacagattagacggaaaaatggaa
agctcagagaggcagaagttggtggataggttcaacgaagctcggaacgaaagggtgaaa
tgtgtattgatttctacgagggccggatctctagggattaatctttatgcagctaatcga
gtcatcatcatcgatggctcgtggaacccgacgtatgatcttcaagctatataccgggct
tggagatatggtcagacgaagccggtcttcgcctaccgtttgatcgctaaagggacattg
gaggagaagatctacaaacgtcaggtgaacaaggaaggccttgcagcgcgggttgtcgac
aagcagcaagtccacaggaatatttcgagaggtgaaatggtggattttttttattttgct
gacgacgaaagtgctgttgtatcgtgtgatttggagcacgagcgggctgtggataatccg
gacactgcgggtagcatgagggatatgttgaagcagcgccggccgccttctcttggagct
tcttcggacaaagtaatgcagagtttgctcagcaaacatcagcccagatggattgtgagt
catcacgagcacgaggcgctcttgcaagagaacgaagacgagaagctctcgaaagaggag
caagactcagcgtgggaggtgtacaagaagacgcccgagttggtggcagtcccgcgcgtt
tctccaaacgattgctccactgatcagtataaggtctctgtcgataaattcgcactgcag
agctcagcggttgtgtctgctgcagttgagtcgaagccagcggttctcatggttgagaca
gccgagaatgatccagtagcacgggacacgagccgtggtgggaagtgcacgaaggtgatg
catcaactaacattgaggagtcaaggcacgaagataggttgtagcaccatttgtgaagaa
tgtgggcaagaagtaagttgggagcttttgggggtataa
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